RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 EAPPQ56P03 285 aaPredicted RBP13.78□□□□□ -0.2
TMCO1-202ENST00000392129 MUM1L1Q5H9M0 696 aa13.78□□□□□ -0.2
TMCO1-202ENST00000392129 CDK5RAP3Q96JB5 506 aa13.78□□□□□ -0.2
TMCO1-202ENST00000392129 BLOC1S4Q9NUP1 217 aa13.78□□□□□ -0.2
TMCO1-202ENST00000392129 RMND1Q9NWS8 449 aa13.78□□□□□ -0.2
TMCO1-202ENST00000392129 STK17AQ9UEE5 414 aa13.78□□□□□ -0.2
TMCO1-202ENST00000392129 OAZ1P54368 228 aa13.77□□□□□ -0.21
TMCO1-202ENST00000392129 SPIRE1Q08AE8 756 aa13.77□□□□□ -0.21
TMCO1-202ENST00000392129 PNMA8AQ86V59 439 aaPredicted RBP13.77□□□□□ -0.21
TMCO1-202ENST00000392129 ANKRD13AQ8IZ07 590 aa13.77□□□□□ -0.21
TMCO1-202ENST00000392129 CNKSR2Q8WXI2 1034 aa13.77□□□□□ -0.21
TMCO1-202ENST00000392129 TRERF1Q96PN7 1200 aa13.77□□□□□ -0.21
TMCO1-202ENST00000392129 HSD3B7Q9H2F3 369 aa13.77□□□□□ -0.21
TMCO1-202ENST00000392129 HOMER2Q9NSB8 354 aa13.77□□□□□ -0.21
TMCO1-202ENST00000392129 HOXC10Q9NYD6 342 aa13.77□□□□□ -0.21
TMCO1-202ENST00000392129 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
TMCO1-202ENST00000392129 COL20A1Q9P218 1284 aa13.77□□□□□ -0.21
TMCO1-202ENST00000392129 PTMAP06454 111 aaKnown RBP13.76□□□□□ -0.21
TMCO1-202ENST00000392129 UBXN2AP68543 259 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 AMPD3Q01432 767 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 PPATQ06203 517 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 FMR1Q06787 632 aaKnown RBP eCLIP13.76□□□□□ -0.21
TMCO1-202ENST00000392129 ECM1Q16610 540 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 TMEM119Q4V9L6 283 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 CEP55Q53EZ4 464 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 HYIQ5T013 277 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 ENOX1Q8TC92 643 aaKnown RBP13.76□□□□□ -0.21
TMCO1-202ENST00000392129 SYTL5Q8TDW5 730 aaPredicted RBP13.76□□□□□ -0.21
TMCO1-202ENST00000392129 C7orf25Q9BPX7 421 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 TRIM9Q9C026 710 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 RABGAP1Q9Y3P9 1069 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 PPP1R3GB7ZBB8 358 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 MEIS1O00470 390 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 SLC26A4O43511 780 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 KLRC4O43908 158 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
TMCO1-202ENST00000392129 CCT6AP40227 531 aaKnown RBP13.76□□□□□ -0.21
TMCO1-202ENST00000392129 SEMA3FQ13275 785 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 KCNB1Q14721 858 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 MOB2Q70IA6 237 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 SV2BQ7L1I2 683 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.76□□□□□ -0.21
TMCO1-202ENST00000392129 ERO1BQ86YB8 467 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 LARP4BQ92615 738 aaKnown RBP13.76□□□□□ -0.21
TMCO1-202ENST00000392129 MED15Q96RN5 788 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 ELP3Q9H9T3 547 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 ZNF214Q9UL59 606 aaPredicted RBP13.76□□□□□ -0.21
TMCO1-202ENST00000392129 RIPK3Q9Y572 518 aa13.76□□□□□ -0.21
TMCO1-202ENST00000392129 MYPNQ86TC9 1320 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 RPTORQ8N122 1335 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
TMCO1-202ENST00000392129 ATP2A1O14983 1001 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 STAT3P40763 770 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 RPS6P62753 249 aaKnown RBP13.75□□□□□ -0.21
TMCO1-202ENST00000392129 TTLL12Q14166 644 aaPredicted RBP13.75□□□□□ -0.21
TMCO1-202ENST00000392129 MCM6Q14566 821 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 TMEM132BQ14DG7 1078 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 ZNF658Q5TYW1 1059 aaPredicted RBP13.75□□□□□ -0.21
TMCO1-202ENST00000392129 SMYD4Q8IYR2 804 aaPredicted RBP13.75□□□□□ -0.21
TMCO1-202ENST00000392129 RAD54LQ92698 747 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 MRFAP1L1Q96HT8 127 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 CLMNQ96JQ2 1002 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 NT5C3AQ9H0P0 336 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 FANCLQ9NW38 375 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 KDM3AQ9Y4C1 1321 aa13.75□□□□□ -0.21
TMCO1-202ENST00000392129 RLFQ13129 1914 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 CXCL11O14625 94 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 IRF6O14896 467 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 RHOBTB3O94955 611 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 KMT5BQ4FZB7 885 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 SNRNP48Q6IEG0 339 aaKnown RBP13.74□□□□□ -0.21
TMCO1-202ENST00000392129 KCNK18Q7Z418 384 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 RNF146Q9NTX7 359 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 VAV3Q9UKW4 847 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 STK24Q9Y6E0 443 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 SCN4AP35499 1836 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 PARP14Q460N5 1801 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 SPDYE5A6NIY4 337 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 CDC25BP30305 580 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 DHX8Q14562 1220 aaKnown RBP13.74□□□□□ -0.21
TMCO1-202ENST00000392129 TREML2Q5T2D2 321 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 NCAPH2Q6IBW4 605 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 KLHL10Q6JEL2 608 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 RNF207Q6ZRF8 634 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 SPC24Q8NBT2 197 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 ERMNQ8TAM6 284 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 SLC5A5Q92911 643 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 OTUD5Q96G74 571 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
TMCO1-202ENST00000392129 MXRA8Q9BRK3 442 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 TEX13BQ9BXU2 312 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 KIAA1024Q9UPX6 916 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 NFE2L3Q9Y4A8 694 aa13.74□□□□□ -0.21
TMCO1-202ENST00000392129 A0A0G2JLL6 359 aaPredicted RBP13.73□□□□□ -0.21
TMCO1-202ENST00000392129 MYMKA6NI61 221 aa13.73□□□□□ -0.21
TMCO1-202ENST00000392129 MED24O75448 989 aa13.73□□□□□ -0.21
TMCO1-202ENST00000392129 PSMD10O75832 226 aa13.73□□□□□ -0.21
TMCO1-202ENST00000392129 ARP10275 920 aa13.73□□□□□ -0.21
TMCO1-202ENST00000392129 ATP1A3P13637 1013 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms