RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 MAGED2Q9UNF1 606 aaPredicted RBP17.51■□□□□ 0.39
SHANK1-204ENST00000391814 PPP2R2AP63151 447 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 C1orf146Q5VVC0 180 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.51■□□□□ 0.39
SHANK1-204ENST00000391814 KDM5BQ9UGL1 1544 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 N4BP1O75113 896 aaKnown RBP17.5■□□□□ 0.39
SHANK1-204ENST00000391814 KITP10721 976 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 CUL4AQ13619 759 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 FAM47EQ6ZV65 393 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 NSUN7Q8NE18 718 aaKnown RBP17.5■□□□□ 0.39
SHANK1-204ENST00000391814 GSDMAQ96QA5 445 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 RNF14Q9UBS8 474 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 DDX25Q9UHL0 483 aaKnown RBP17.5■□□□□ 0.39
SHANK1-204ENST00000391814 KDM1AO60341 852 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 LRRC41Q15345 812 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 DUOX2Q9NRD8 1548 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 MAPK4P31152 587 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 NYXQ9GZU5 481 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 MLXIPLQ9NP71 852 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 SERPING1P05155 500 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 OCA2Q04671 838 aa17.5■□□□□ 0.39
SHANK1-204ENST00000391814 CPP00450 1065 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 CARD10Q9BWT7 1032 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 ARHGEF12Q9NZN5 1544 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 DYNLT1P63172 113 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 DEPDC1BQ8WUY9 529 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 OLFM3Q96PB7 478 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 CACYBPQ9HB71 228 aaKnown RBP17.49■□□□□ 0.39
SHANK1-204ENST00000391814 C1orf112Q9NSG2 853 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 FGFR1OP2Q9NVK5 253 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 STRIP2Q9ULQ0 834 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 ELF1P32519 619 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 ITKQ08881 620 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 GFPT2O94808 682 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 RESTQ13127 1097 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 SLC12A1Q13621 1099 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 SARM1Q6SZW1 724 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 MB21D1Q8N884 522 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 KIAA0586Q9BVV6 1533 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 HOXC9P31274 260 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 PIK3CAP42336 1068 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 TFAP4Q01664 338 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 SMCR8Q8TEV9 937 aaPredicted RBP17.49■□□□□ 0.39
SHANK1-204ENST00000391814 ZNF653Q96CK0 615 aa17.49■□□□□ 0.39
SHANK1-204ENST00000391814 TRPC5Q9UL62 973 aaPredicted RBP17.49■□□□□ 0.39
SHANK1-204ENST00000391814 CHL1O00533 1208 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 ZYXQ15942 572 aaKnown RBP17.48■□□□□ 0.39
SHANK1-204ENST00000391814 FANCBQ8NB91 859 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 LINC00301Q8NCQ3 95 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 MCUQ8NE86 351 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 DDX17Q92841 729 aaKnown RBP17.48■□□□□ 0.39
SHANK1-204ENST00000391814 IL17RAQ96F46 866 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 GLT8D2Q9H1C3 349 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 TRPV6Q9H1D0 765 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 PALMO75781 387 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 ATP5HO75947 161 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 GUCY1A3Q02108 690 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 THAP9Q9H5L6 903 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 AFPP02771 609 aaKnown RBP17.48■□□□□ 0.39
SHANK1-204ENST00000391814 DLATP10515 647 aaKnown RBP17.48■□□□□ 0.39
SHANK1-204ENST00000391814 AP2B1P63010 937 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 DHTKD1Q96HY7 919 aaPredicted RBP17.48■□□□□ 0.39
SHANK1-204ENST00000391814 LZTS1Q9Y250 596 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 DHX40Q8IX18 779 aaKnown RBP17.48■□□□□ 0.39
SHANK1-204ENST00000391814 ARHGAP18Q8N392 663 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 M0R2C6 588 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 FMNL1O95466 1100 aaPredicted RBP17.48■□□□□ 0.39
SHANK1-204ENST00000391814 OLFML2BQ68BL8 750 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 RNF207Q6ZRF8 634 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.48■□□□□ 0.39
SHANK1-204ENST00000391814 INSRP06213 1382 aa17.48■□□□□ 0.39
SHANK1-204ENST00000391814 GCFC2P16383 781 aaKnown RBP17.47■□□□□ 0.39
SHANK1-204ENST00000391814 ENOX1Q8TC92 643 aaKnown RBP17.47■□□□□ 0.39
SHANK1-204ENST00000391814 KCNF1Q9H3M0 494 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 STOML1Q9UBI4 398 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 HDAC6Q9UBN7 1215 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 GGT7Q9UJ14 662 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 STXBP3O00186 592 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 SLFN14P0C7P3 912 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.47■□□□□ 0.39
SHANK1-204ENST00000391814 KRT1P04264 644 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 HIBADHP31937 336 aaKnown RBP17.47■□□□□ 0.39
SHANK1-204ENST00000391814 POLR3CQ9BUI4 534 aaPredicted RBP17.47■□□□□ 0.39
SHANK1-204ENST00000391814 KRT14P02533 472 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 NSFP46459 744 aaKnown RBP17.47■□□□□ 0.39
SHANK1-204ENST00000391814 YWHAEP62258 255 aaKnown RBP17.47■□□□□ 0.39
SHANK1-204ENST00000391814 NOP9Q86U38 636 aaKnown RBP17.47■□□□□ 0.39
SHANK1-204ENST00000391814 NACA2Q9H009 215 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 GOLPH3LQ9H4A5 285 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 SCG2P13521 617 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 MAN2A1Q16706 1144 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 EPM2AIP1Q7L775 607 aaPredicted RBP17.47■□□□□ 0.39
SHANK1-204ENST00000391814 PRPF38AQ8NAV1 312 aaKnown RBP17.47■□□□□ 0.39
SHANK1-204ENST00000391814 TGFBRAP1Q8WUH2 860 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 NEK8Q86SG6 692 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 IFNL3Q8IZI9 196 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 PAGE5Q96GU1 130 aa17.47■□□□□ 0.39
SHANK1-204ENST00000391814 PPARGC1AQ9UBK2 798 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms