RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 ADD3Q9UEY8 706 aaKnown RBP13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 GOLGA8KD6RF30 607 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 IGSF3O75054 1194 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 LMNB2Q03252 620 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 FAM196AQ6ZSG2 479 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 YWHAGP61981 247 aaKnown RBP eCLIP13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 CCDC17Q96LX7 622 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 LARSQ9P2J5 1176 aaKnown RBP13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 NCAPD2Q15021 1401 aa13.4□□□□□ -0.27
KCNQ3-201ENST00000388996 ESYT2A0FGR8 921 aa13.4□□□□□ -0.27
KCNQ3-201ENST00000388996 BUB1O43683 1085 aa13.4□□□□□ -0.27
KCNQ3-201ENST00000388996 ZC3H13Q5T200 1668 aaKnown RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 RNF123Q5XPI4 1314 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 POLR2FP61218 127 aaKnown RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 ZNF577Q9BSK1 485 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 E9PCH4 1651 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 GCFC2P16383 781 aaKnown RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 IL6STP40189 918 aaPredicted RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 GARSP41250 739 aaKnown RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 JADE1Q6IE81 842 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 MAP7D3Q8IWC1 876 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 CNOT6LQ96LI5 555 aaKnown RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 AK8Q96MA6 479 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 DBNLQ9UJU6 430 aaKnown RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 FMNL1O95466 1100 aaPredicted RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 APOL6Q9BWW8 343 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 RNF26Q9BY78 433 aaPredicted RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 AP5M1Q9H0R1 490 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 XPOTO43592 962 aaKnown RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 IRX4P78413 519 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 ARHGEF6Q15052 776 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 JPH2Q9BR39 696 aaPredicted RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 BTBD18B2RXH4 712 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 CC2D2BQ6DHV5 1058 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 EXOC8Q8IYI6 725 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 CDHR1Q96JP9 859 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 SAT1P21673 171 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 PDIA3P30101 505 aaKnown RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 ECE1P42892 770 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 SDK1Q7Z5N4 2213 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 H7C0C1 242 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 ATP5OP48047 213 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 USPL1Q5W0Q7 1092 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 NCAPGQ9BPX3 1015 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 XPAP23025 273 aaPredicted RBP13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 ZNF853P0CG23 659 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 PHLDB3Q6NSJ2 640 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 PPP1R2P3Q6NXS1 205 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 FAM71BQ8TC56 605 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 FAM81BQ96LP2 452 aa13.39□□□□□ -0.27
KCNQ3-201ENST00000388996 STK38LQ9Y2H1 464 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 MAD1L1Q9Y6D9 718 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 RNF8O76064 485 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 MYO1EQ12965 1108 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 SMAP1Q8IYB5 467 aaPredicted RBP13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 SDCCAG3Q96C92 435 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 HDAC11Q96DB2 347 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 BAG5Q9UL15 447 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 TCP1P17987 556 aaKnown RBP13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 APOA5Q6Q788 366 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 ACCSQ96QU6 501 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 HAUS8Q9BT25 410 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 PI4K2BQ8TCG2 481 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 RNASELQ05823 741 aaKnown RBP13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 TSTA3Q13630 321 aaPredicted RBP13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 TTBK2Q6IQ55 1244 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 KCTD1Q719H9 257 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 TUBGCP2Q9BSJ2 902 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 CLIC4Q9Y696 253 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 ADGRL3Q9HAR2 1447 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 HMGB1P1B2RPK0 211 aaPredicted RBP13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 GBP5Q96PP8 586 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 ZNF215Q9UL58 517 aaPredicted RBP13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 Q3C1V9 767 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 KAZNQ674X7 775 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 ABI1Q8IZP0 508 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 CDKL2Q92772 493 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 OSBPP22059 807 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 DDIT3P35638 169 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 MUM1Q2TAK8 710 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 SYDE2Q5VT97 1194 aa13.38□□□□□ -0.27
KCNQ3-201ENST00000388996 CDC25BP30305 580 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 DBN1Q16643 649 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 HAUS4Q9H6D7 363 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 EFCC1Q9HA90 598 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 STK17AQ9UEE5 414 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 METP08581 1390 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 EP400NLQ6ZTU2 488 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 PTK2Q05397 1052 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 SUPT20HL1Q3ZLR7 823 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 SLC38A10Q9HBR0 1119 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 MYL1P05976 194 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 TFAMQ00059 246 aaKnown RBP13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 RFX6Q8HWS3 928 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 SERPINB13Q9UIV8 391 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 RASSF7Q02833 373 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 GSDMAQ96QA5 445 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms