RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 USP17L19D6RCP7 530 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 USP17L20D6RJB6 530 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 PRSS44E7EML9 344 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 CYP27B1O15528 508 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 CDC14BO60729 498 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 ABHD16AO95870 558 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 MSX2P35548 267 aaPredicted RBP0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 USP17L24Q0WX57 530 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 FOXL1Q12952 345 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 ADAM9Q13443 819 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 ZNF568Q3ZCX4 644 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 HIST2H2BCQ6DN03 193 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 DTHD1Q6ZMT9 781 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 SLC25A43Q8WUT9 341 aaPredicted RBP0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 TMEM87BQ96K49 555 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 ZNF48Q96MX3 618 aaPredicted RBP0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 ASPNQ9BXN1 380 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 POLIQ9UNA4 740 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 SNCAIPQ9Y6H5 919 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 ZNF521Q96K83 1311 aa0.82□□□□□ -2.28
RNU6-540P-201ENST00000384622 ZNF205O95201 554 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 TNNI2P48788 182 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 TAP1Q03518 808 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 ATXN7L2Q5T6C5 722 aaPredicted RBP0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 GFI1BQ5VTD9 330 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 AWAT2Q6E213 333 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 C11orf87Q6NUJ2 197 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 PRPF40BQ6NWY9 871 aaKnown RBP0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 LLGL2Q6P1M3 1020 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 TRMT10BQ6PF06 316 aaKnown RBP0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 KCNV1Q6PIU1 500 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 LRP10Q7Z4F1 713 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 AEBP1Q8IUX7 1158 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 SH2D3CQ8N5H7 860 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 NAT16Q8N8M0 369 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 DTX3Q8N9I9 347 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 SUPT20HQ8NEM7 779 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 ZCCHC14Q8WYQ9 949 aaKnown RBP0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 LENG9Q96B70 501 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 ZSWIM3Q96MP5 696 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 CLIC6Q96NY7 704 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 UCN2Q96RP3 112 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 AP5S1Q9NUS5 200 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 CROTQ9UKG9 612 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 OAZ3Q9UMX2 235 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 ICKQ9UPZ9 632 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 SAMM50Q9Y512 469 aa0.81□□□□□ -2.28
RNU6-540P-201ENST00000384622 CAPN14A8MX76 684 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 TP73O15350 636 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 PRMT3O60678 531 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 IGLV2-14P01704 120 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 PGRP06401 933 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 BMP6P22004 513 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 RPS19P39019 145 aaKnown RBP0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 USP14P54578 494 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 CORO7P57737 925 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 LRRC14Q15048 493 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 NOM1Q5C9Z4 860 aaKnown RBP0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 LCE3CQ5T5A8 94 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 RHOUQ7L0Q8 258 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 GPR155Q7Z3F1 870 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 MCATQ8IVS2 390 aaKnown RBP0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 ZNF513Q8N8E2 541 aaPredicted RBP0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 SIMC1Q8NDZ2 872 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 CYB5D2Q8WUJ1 264 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 PCDHB5Q9Y5E4 795 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 TRIOBPQ9H2D6 2365 aa0.8□□□□□ -2.28
RNU6-540P-201ENST00000384622 FAM196BA6NMK8 535 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 MATN4O95460 622 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 CGAP01215 116 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 KRT2P35908 639 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 USP5P45974 858 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 MAPK8P45983 427 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 SRSF7Q16629 238 aaKnown RBP eCLIP0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 SLC44A4Q53GD3 710 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 WIPI1Q5MNZ9 446 aaPredicted RBP0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 ZNF662Q6ZS27 426 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 BMP8AQ7Z5Y6 402 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 NETO2Q8NC67 525 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 DPYSL5Q9BPU6 564 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 HIRIP3Q9BW71 556 aaPredicted RBP0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 PLA2G12BQ9BX93 195 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 NPHS2Q9NP85 383 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 PLA2G3Q9NZ20 509 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 TRAK1Q9UPV9 953 aa0.79□□□□□ -2.28
RNU6-540P-201ENST00000384622 TRAF5O00463 557 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 FAM20BO75063 409 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 GADD45BO75293 160 aaPredicted RBP0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 ITGB1P05556 798 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 LMNB1P20700 586 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 CXCR5P32302 372 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 TAF6P49848 677 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 FCGRTP55899 365 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 OCA2Q04671 838 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 Q6ZUG5 572 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 TMC3Q7Z5M5 1100 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 PHACTR4Q8IZ21 702 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 NUDT10Q8NFP7 164 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 NLGN2Q8NFZ4 835 aa0.78□□□□□ -2.28
RNU6-540P-201ENST00000384622 FAM200AQ8TCP9 573 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms