RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 SDK2Q58EX2 2172 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 CD163L1Q9NR16 1453 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 DDX60Q8IY21 1712 aaKnown RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 SDK1Q7Z5N4 2213 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 FAM171A2A8MVW0 826 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 NKRFO15226 690 aaKnown RBP eCLIP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 GRM6O15303 877 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 TLX3O43711 291 aaPredicted RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 HTATSF1O43719 755 aaKnown RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 PPFIA3O75145 1194 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 LRRN2O75325 713 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 SEMA7AO75326 666 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 PPFIA2O75334 1257 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 GLRX3O76003 335 aaKnown RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 SASH1O94885 1247 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 EPN2O95208 641 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 CAVIN2O95810 425 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 ACTN2P35609 894 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 CASRP41180 1078 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 GCLCP48506 637 aaPredicted RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 NRIP1P48552 1158 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 CDK7P50613 346 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 PTH1RQ03431 593 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 SRSF5Q13243 272 aaKnown RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 FAM110CQ1W6H9 321 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 SKIDA1Q1XH10 827 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 C2orf27AQ580R0 203 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 KIAA1614Q5VZ46 1190 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 TCEAL6Q6IPX3 200 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 ZNF746Q6NUN9 644 aaPredicted RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 TOGARAM2Q6ZUX3 1019 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 PTRH1Q86Y79 214 aaKnown RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 TMEM192Q8IY95 271 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 ULK2Q8IYT8 1036 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 CLASRPQ8N2M8 674 aaKnown RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 UBR7Q8N806 425 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 AMER3Q8N944 861 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 SGMS2Q8NHU3 365 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 PIGOQ8TEQ8 1089 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 TCEAL3Q969E4 200 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 RELTQ969Z4 430 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 ARSGQ96EG1 525 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 TMEM176AQ96HP8 235 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 SCLYQ96I15 445 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 MYD88Q99836 296 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 TSEN34Q9BSV6 310 aaKnown RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 OSBPL6Q9BZF3 934 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 CDT1Q9H211 546 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 TMEM245Q9H330 911 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 TLE6Q9H808 572 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 GPR108Q9NPR9 543 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 CASS4Q9NQ75 786 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 XPNPEP3Q9NQH7 507 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 ARHGEF3Q9NR81 526 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 IGSF9Q9P2J2 1179 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 IQSEC3Q9UPP2 1182 aaPredicted RBP1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 KIF1BO60333 1816 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 DUOX1Q9NRD9 1551 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 IQGAP3Q86VI3 1631 aa1.58□□□□□ -2.16
RNU6-42P-201ENST00000384165 NRXN2Q9P2S2 1712 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 SVEP1Q4LDE5 3571 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 KANSL1LA0AUZ9 987 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 FSD2A1L4K1 749 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 USP17L3A6NCW0 530 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 USP17L4A6NCW7 530 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 UPK3BL1B0FP48 263 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 CHURC1-FNTBB4DL54 471 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 UPK3BL2E5RIL1 263 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 ARVCFO00192 962 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 CXCL11O14625 94 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 CDX4O14627 284 aaPredicted RBP1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 TNFRSF10BO14763 440 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 SEPT4O43236 478 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 CTIFO43310 598 aaKnown RBP1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 NBNO60934 754 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 BAIAP3O94812 1187 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 CSPG5O95196 566 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 MAP4K4O95819 1239 aaPredicted RBP1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 RB1P06400 928 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 FTH1P19P0C7X4 201 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 RARBP10826 455 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 CYP19A1P11511 503 aaPredicted RBP1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 ITGB6P18564 788 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 CYP2C19P33261 490 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 RFC2P35250 354 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 FNTBP49356 437 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 ACLYP53396 1101 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 ATXN3P54252 364 aaPredicted RBP1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 CABP4P57796 275 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 STARD6P59095 220 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 SNRPNP63162 240 aaKnown RBP1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 FAM193AP78312 1265 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 CREB5Q02930 508 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 SRSF6Q13247 344 aaKnown RBP1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 RASA3Q14644 834 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 DLGAP5Q15398 846 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 GRIK4Q16099 956 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 RGL3Q3MIN7 710 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 CRY2Q49AN0 593 aa1.57□□□□□ -2.16
RNU6-42P-201ENST00000384165 C6orf118Q5T5N4 469 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms