RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 NKX2-4Q9H2Z4 354 aa4.43□□□□□ -1.7
RNU6-1040P-201ENST00000383974 PCDH18Q9HCL0 1135 aa4.43□□□□□ -1.7
RNU6-1040P-201ENST00000383974 NOP56O00567 594 aaKnown RBP4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 NAT2P11245 290 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 TNFRSF1AP19438 455 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 STAT5AP42229 794 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 ZNF143P52747 638 aaPredicted RBP4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 FAM26FQ5R3K3 315 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 MCTP2Q6DN12 878 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 MILR1Q7Z6M3 343 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 ZC3H18Q86VM9 953 aaKnown RBP4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 NLRP10Q86W26 655 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 CCDC103Q8IW40 242 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 FAM126BQ8IXS8 530 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 LOXL4Q96JB6 756 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 MRGPRX3Q96LB0 322 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 C8orf49Q96NF6 230 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 CYP26B1Q9NR63 512 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 INVSQ9Y283 1065 aa4.42□□□□□ -1.7
RNU6-1040P-201ENST00000383974 MROH6A6NGR9 719 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 TBX1O43435 398 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 ZNF20P17024 532 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 RPL11P62913 178 aaKnown RBP4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 NCAPHQ15003 741 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 PRR31Q5SQ13 230 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 MROH9Q5TGP6 573 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 RIOX2Q8IUF8 465 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 LGI4Q8N135 537 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 Q8N1Y9 231 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 TTC9BQ8N6N2 239 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 ANAPC16Q96DE5 110 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 SEC16BQ96JE7 1060 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 SAMD11Q96NU1 681 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 FBXL7Q9UJT9 491 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 STRIP2Q9ULQ0 834 aa4.41□□□□□ -1.7
RNU6-1040P-201ENST00000383974 ZBTB7CA1YPR0 619 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 DDX3XO00571 662 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 MATN3O15232 486 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 BCL6P41182 706 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 KIAA2012Q0VF49 1180 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ADAM9Q13443 819 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 CR1LQ2VPA4 569 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 CPZQ66K79 652 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 E4F1Q66K89 784 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 BORAQ6PGQ7 559 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 FAM124AQ86V42 546 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 TTLL6Q8N841 843 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 TXNDC5Q8NBS9 432 aaKnown RBP4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 BTN2A2Q8WVV5 523 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 YIPF4Q9BSR8 244 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 SSBP3Q9BWW4 388 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 C1QTNF3Q9BXJ4 246 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 KRTAP17-1Q9BYP8 105 aa4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 TMEFF2Q9UIK5 374 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 TIMM13Q9Y5L4 95 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1040P-201ENST00000383974 C1QTNF3-AMACRE9PGA6 284 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ARNTLO00327 626 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ITGAVP06756 1048 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ZNF28P17035 718 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ZXDAP98168 799 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 C6orf15Q6UXA7 325 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 CEP68Q76N32 757 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ZNF227Q86WZ6 799 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 DIO2Q92813 273 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 TRMT2BQ96GJ1 504 aaKnown RBP4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 TMEM169Q96HH4 297 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ZSWIM3Q96MP5 696 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ACBD3Q9H3P7 528 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 X6R8D5 127 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ZNF536O15090 1300 aa4.39□□□□□ -1.71
RNU6-1040P-201ENST00000383974 B2RBV5 119 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 MEFVO15553 781 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 MYO1BO43795 1136 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 AKAP8O43823 692 aaKnown RBP4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 B4GALT3O60512 393 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 SNRPB2P08579 225 aaKnown RBP4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ECI1P42126 302 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 NKX3-2P78367 333 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 KCNAB2Q13303 367 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 SF1Q15637 639 aaKnown RBP4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 PRSS53Q2L4Q9 553 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 PRAMEF18Q5VWM3 479 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 IQCEQ6IPM2 695 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 LIMS2Q7Z4I7 341 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 KREMEN2Q8NCW0 462 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 RCBTB1Q8NDN9 531 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 MRRFQ96E11 262 aaKnown RBP4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 LCORQ96JN0 433 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 TGIF2Q9GZN2 237 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 NGRNQ9NPE2 291 aaKnown RBP4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ST6GALNAC2Q9UJ37 374 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 ZNF652Q9Y2D9 606 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 INPP5FQ9Y2H2 1132 aa4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 COA3Q9Y2R0 106 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1040P-201ENST00000383974 C9orf118A6NHY6 69 aa4.37□□□□□ -1.71
RNU6-1040P-201ENST00000383974 SMAD7O15105 426 aaKnown RBP4.37□□□□□ -1.71
RNU6-1040P-201ENST00000383974 SCG5P05408 212 aa4.37□□□□□ -1.71
RNU6-1040P-201ENST00000383974 HOXC12P31275 282 aa4.37□□□□□ -1.71
RNU6-1040P-201ENST00000383974 GTF2A2P52657 109 aa4.37□□□□□ -1.71
RNU6-1040P-201ENST00000383974 SV2CQ496J9 727 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms