RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 PAX3P23760 479 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 RETREG2Q8NC44 543 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 GDF3Q9NR23 364 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 BTBD18B2RXH4 712 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 CHN1P15882 459 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
VLDLR-202ENST00000382099 NT5DC1Q5TFE4 455 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 LRRC45Q96CN5 670 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 CSRNP2Q9H175 543 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.47■□□□□ 0.23
VLDLR-202ENST00000382099 UBE2Q2LH0YL09 131 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 FAM200BP0CF97 657 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 RASSF7Q02833 373 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 NELFBQ8WX92 580 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 ABTB1Q969K4 478 aaPredicted RBP16.47■□□□□ 0.23
VLDLR-202ENST00000382099 NEUROD6Q96NK8 337 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 AGXT2Q9BYV1 514 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 SENP2Q9HC62 589 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 NKX1-2Q9UD57 310 aaPredicted RBP16.47■□□□□ 0.23
VLDLR-202ENST00000382099 FBXL5Q9UKA1 691 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 FAM237AA0A1B0GTK4 181 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 ACTN4O43707 911 aaKnown RBP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 PLEKP08567 350 aaPredicted RBP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 RNASELQ05823 741 aaKnown RBP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 ZWILCHQ9H900 591 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 PLCB1Q9NQ66 1216 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 MAP3K2Q9Y2U5 619 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 ZNF330Q9Y3S2 320 aaPredicted RBP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 GPR75-ASB3A0A0A6YYF3 556 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 PPP1R3GB7ZBB8 358 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 HSPD1P10809 573 aaKnown RBP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 PAK1Q13153 545 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 UCMAQ8WVF2 138 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 DDX27Q96GQ7 796 aaKnown RBP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 EPSTI1Q96J88 318 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 ORAI2Q96SN7 254 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 MOV10L1Q9BXT6 1211 aaKnown RBP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 CWC25Q9NXE8 425 aaPredicted RBP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 LIMA1Q9UHB6 759 aaKnown RBP16.46■□□□□ 0.23
VLDLR-202ENST00000382099 ASB3Q9Y575 518 aa16.46■□□□□ 0.23
VLDLR-202ENST00000382099 CEMIPQ8WUJ3 1361 aa16.46■□□□□ 0.22
VLDLR-202ENST00000382099 SEMA3EO15041 775 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 RARAP10276 462 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 BICDL1Q6ZP65 573 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 CABLES1Q8TDN4 633 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 MAGEC2Q9UBF1 373 aaPredicted RBP16.45■□□□□ 0.22
VLDLR-202ENST00000382099 LNPEPQ9UIQ6 1025 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 DBNLQ9UJU6 430 aaKnown RBP16.45■□□□□ 0.22
VLDLR-202ENST00000382099 KCNJ14Q9UNX9 436 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 BZW2Q9Y6E2 419 aaKnown RBP16.45■□□□□ 0.22
VLDLR-202ENST00000382099 PLEKHG1Q9ULL1 1385 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 RAD51CO43502 376 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 GSTT1P30711 240 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 KLK7P49862 253 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 MB21D1Q8N884 522 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 SLC26A6Q9BXS9 759 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 FAM129AQ9BZQ8 928 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 NSRP1Q9H0G5 558 aaKnown RBP16.45■□□□□ 0.22
VLDLR-202ENST00000382099 HPS5Q9UPZ3 1129 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 ALADP13716 330 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 TNFRSF8P28908 595 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 IARSP41252 1262 aaKnown RBP16.45■□□□□ 0.22
VLDLR-202ENST00000382099 SFSWAPQ12872 951 aaKnown RBP16.45■□□□□ 0.22
VLDLR-202ENST00000382099 ZRSR2Q15696 482 aaKnown RBP16.45■□□□□ 0.22
VLDLR-202ENST00000382099 MREGQ8N565 214 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 MGARPQ8TDB4 240 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 PRMT1Q99873 361 aaKnown RBP16.45■□□□□ 0.22
VLDLR-202ENST00000382099 DBNDD2Q9BQY9 259 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 INTS9Q9NV88 658 aaKnown RBP16.45■□□□□ 0.22
VLDLR-202ENST00000382099 PNMA3Q9UL41 463 aa16.45■□□□□ 0.22
VLDLR-202ENST00000382099 HSPA9P38646 679 aaKnown RBP16.44■□□□□ 0.22
VLDLR-202ENST00000382099 EIF4A1P60842 406 aaKnown RBP16.44■□□□□ 0.22
VLDLR-202ENST00000382099 ITIH3Q06033 890 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 PTPROQ16827 1216 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 ZNF365Q70YC5 407 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 SNRNP27Q8WVK2 155 aaKnown RBP16.44■□□□□ 0.22
VLDLR-202ENST00000382099 DNAJC9Q8WXX5 260 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 MYL10Q9BUA6 226 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 VCX3BQ9H321 246 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 VCX3AQ9NNX9 186 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 ATXN10Q9UBB4 475 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 PACSIN2Q9UNF0 486 aaPredicted RBP16.44■□□□□ 0.22
VLDLR-202ENST00000382099 PCDHB6Q9Y5E3 794 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 DIP2AQ14689 1571 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 FTCDO95954 541 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 PTPREP23469 700 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 IGHMBP2P38935 993 aaKnown RBP16.44■□□□□ 0.22
VLDLR-202ENST00000382099 COPS2P61201 443 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 RCN2Q14257 317 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 CCDC6Q16204 474 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 PAGE5Q96GU1 130 aa16.44■□□□□ 0.22
VLDLR-202ENST00000382099 TRIM49BA6NDI0 452 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 ATP6V1C1P21283 382 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 ITIH4Q14624 930 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 LBRQ14739 615 aaKnown RBP16.43■□□□□ 0.22
VLDLR-202ENST00000382099 WASHC4Q2M389 1173 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 ERMARDQ5T6L9 678 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms