RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 NUP58Q9BVL2 599 aa16.35■□□□□ 0.21
TUSC3-201ENST00000382020 DDX47Q9H0S4 455 aaKnown RBP16.35■□□□□ 0.21
TUSC3-201ENST00000382020 MLXIPLQ9NP71 852 aa16.35■□□□□ 0.21
TUSC3-201ENST00000382020 DONSONQ9NYP3 566 aa16.35■□□□□ 0.21
TUSC3-201ENST00000382020 TNNC1P63316 161 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 PKN1Q16512 942 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 TSGA10Q9BZW7 698 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
TUSC3-201ENST00000382020 KIAA1024Q9UPX6 916 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 EEF1GP26641 437 aaKnown RBP16.34■□□□□ 0.21
TUSC3-201ENST00000382020 PEX26Q7Z412 305 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 SYCP3Q8IZU3 236 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 UBXN6Q9BZV1 441 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 KCNK9Q9NPC2 374 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 ATP8A1Q9Y2Q0 1164 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 STK36Q9NRP7 1315 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 FAM196BA6NMK8 535 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 GCOM1H8Y6P7 765 aaPredicted RBP16.34■□□□□ 0.21
TUSC3-201ENST00000382020 MEFVO15553 781 aaPredicted RBP16.34■□□□□ 0.21
TUSC3-201ENST00000382020 CSF1RP07333 972 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 MYZAPP0CAP1 466 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 NR1D1P20393 614 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 PABPC4Q13310 644 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■□□□ 12.8
TUSC3-201ENST00000382020 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 STIM2Q9P246 746 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 CD2APQ9Y5K6 639 aa16.34■□□□□ 0.21
TUSC3-201ENST00000382020 KRIT1O00522 736 aa16.33■□□□□ 0.21
TUSC3-201ENST00000382020 TDP2O95551 362 aa16.33■□□□□ 0.21
TUSC3-201ENST00000382020 PDHBP11177 359 aa16.33■□□□□ 0.21
TUSC3-201ENST00000382020 CDC25CP30307 473 aa16.33■□□□□ 0.21
TUSC3-201ENST00000382020 UBXN2AP68543 259 aa16.33■□□□□ 0.21
TUSC3-201ENST00000382020 MEX3CQ5U5Q3 659 aaKnown RBP16.33■□□□□ 0.21
TUSC3-201ENST00000382020 HAUS2Q9NVX0 235 aa16.33■□□□□ 0.21
TUSC3-201ENST00000382020 STK38LQ9Y2H1 464 aa16.33■□□□□ 0.21
TUSC3-201ENST00000382020 COPB2P35606 906 aa16.33■□□□□ 0.2
TUSC3-201ENST00000382020 TROAPQ12815 778 aa16.33■□□□□ 0.2
TUSC3-201ENST00000382020 ZYXQ15942 572 aaKnown RBP16.33■□□□□ 0.2
TUSC3-201ENST00000382020 CCNI2Q6ZMN8 369 aaPredicted RBP16.33■□□□□ 0.2
TUSC3-201ENST00000382020 GPBP1Q86WP2 473 aa16.33■□□□□ 0.2
TUSC3-201ENST00000382020 SUGP1Q8IWZ8 645 aaKnown RBP16.33■□□□□ 0.2
TUSC3-201ENST00000382020 TRIM6Q9C030 488 aaPredicted RBP16.33■□□□□ 0.2
TUSC3-201ENST00000382020 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
TUSC3-201ENST00000382020 NPHP3-ACAD11A0A0J9YXS1 232 aa16.33■□□□□ 0.2
TUSC3-201ENST00000382020 ENO4A6NNW6 628 aa16.33■□□□□ 0.2
TUSC3-201ENST00000382020 DDX39AO00148 427 aaKnown RBP16.33■□□□□ 0.2
TUSC3-201ENST00000382020 TCP1P17987 556 aaKnown RBP16.33■□□□□ 0.2
TUSC3-201ENST00000382020 SARSP49591 514 aaKnown RBP16.33■□□□□ 0.2
TUSC3-201ENST00000382020 KCTD1Q719H9 257 aa16.33■□□□□ 0.2
TUSC3-201ENST00000382020 PHLDB2Q86SQ0 1253 aa16.33■□□□□ 0.2
TUSC3-201ENST00000382020 CHORDC1Q9UHD1 332 aaPredicted RBP16.33■□□□□ 0.2
TUSC3-201ENST00000382020 TMOD1P28289 359 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 SCNN1DP51172 638 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 HDLBPQ00341 1268 aaKnown RBP16.32■□□□□ 0.2
TUSC3-201ENST00000382020 MYOCDQ8IZQ8 938 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 FNBP4Q8N3X1 1017 aaPredicted RBP16.32■□□□□ 0.2
TUSC3-201ENST00000382020 SH3RF3Q8TEJ3 882 aaPredicted RBP16.32■□□□□ 0.2
TUSC3-201ENST00000382020 LARP4BQ92615 738 aaKnown RBP16.32■□□□□ 0.2
TUSC3-201ENST00000382020 MYO1AQ9UBC5 1043 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 LIMA1Q9UHB6 759 aaKnown RBP16.32■□□□□ 0.2
TUSC3-201ENST00000382020 NOVA2Q9UNW9 492 aaKnown RBP16.32■□□□□ 0.2
TUSC3-201ENST00000382020 LOC102724428A0A0B4J2F2 783 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 LRRN2O75325 713 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 TBCAO75347 108 aaKnown RBP16.32■□□□□ 0.2
TUSC3-201ENST00000382020 CYP19A1P11511 503 aaPredicted RBP16.32■□□□□ 0.2
TUSC3-201ENST00000382020 BRD2P25440 801 aaKnown RBP16.32■□□□□ 0.2
TUSC3-201ENST00000382020 SIK1P57059 783 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 TRIM68Q6AZZ1 485 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 CAPN12Q6ZSI9 719 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 ADSSL1Q8N142 457 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 ANKRD42Q8N9B4 389 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 C3P01024 1663 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 ABCC12Q96J65 1359 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 MYBL1P10243 752 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 ADAM9Q13443 819 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 FAM26FQ5R3K3 315 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 CDKAL1Q5VV42 579 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 CCDC84Q86UT8 332 aaPredicted RBP16.32■□□□□ 0.2
TUSC3-201ENST00000382020 SLAIN2Q9P270 581 aa16.32■□□□□ 0.2
TUSC3-201ENST00000382020 KCNQ2O43526 872 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 ACTN1P12814 892 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 MYO1EQ12965 1108 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 PFKFB3Q16875 520 aaPredicted RBP16.31■□□□□ 0.2
TUSC3-201ENST00000382020 GLIS3Q8NEA6 775 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 LBHD1Q9BQE6 289 aaPredicted RBP16.31■□□□□ 0.2
TUSC3-201ENST00000382020 RGPD8O14715 1765 aaPredicted RBP16.31■□□□□ 0.2
TUSC3-201ENST00000382020 UFL1O94874 794 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 EPHB4P54760 987 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 FMNL3Q8IVF7 1028 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 RNPC3Q96LT9 517 aaKnown RBP16.31■□□□□ 0.2
TUSC3-201ENST00000382020 ZNF287Q9HBT7 754 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 PANK4Q9NVE7 773 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 ARPP21Q9UBL0 812 aaPredicted RBP16.31■□□□□ 0.2
TUSC3-201ENST00000382020 PLAAQ9Y263 795 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 PTPN22Q9Y2R2 807 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 GOLGA6L10A0A0M3HER8 536 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 E9PMD0 336 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 GCNT3O95395 438 aa16.31■□□□□ 0.2
TUSC3-201ENST00000382020 DHX9Q08211 1270 aaKnown RBP16.31■□□□□ 0.2
TUSC3-201ENST00000382020 ZNF211Q13398 564 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms