RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ZNF713Q8N859 430 aaPredicted RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 FAM76AQ8TAV0 307 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 DNAJC7Q99615 494 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 TDRD3Q9H7E2 651 aaKnown RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 PCDHA6Q9UN73 950 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 CTNND2Q9UQB3 1225 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 PCDHA8Q9Y5H6 950 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 COL2A1P02458 1487 aaPredicted RBP9.94□□□□□ -0.82
GPNMB-202ENST00000381990 A0A087X0B3 334 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 KCNJ18B7U540 433 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 ZNF543Q08ER8 600 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 KCNJ12Q14500 433 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 SWT1Q5T5J6 900 aaKnown RBP9.94□□□□□ -0.82
GPNMB-202ENST00000381990 ARL6IP4Q66PJ3 421 aaKnown RBP9.94□□□□□ -0.82
GPNMB-202ENST00000381990 MMS22LQ6ZRQ5 1243 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 RASGRP4Q8TDF6 673 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 EPSTI1Q96J88 318 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 PIGSQ96S52 555 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 UBA5Q9GZZ9 404 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 C6orf50Q9HD87 102 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 GUCA1BQ9UMX6 200 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 FRMPD2Q68DX3 1309 aaPredicted RBP9.94□□□□□ -0.82
GPNMB-202ENST00000381990 ESYT2A0FGR8 921 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 H7C1D1 291 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 ABL1P00519 1130 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 VIL1P09327 827 aaKnown RBP9.94□□□□□ -0.82
GPNMB-202ENST00000381990 GNA11P29992 359 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 MCM7P33993 719 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 ITIH3Q06033 890 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 CERKLQ49MI3 558 aaPredicted RBP9.94□□□□□ -0.82
GPNMB-202ENST00000381990 GPATCH4Q5T3I0 446 aaKnown RBP9.94□□□□□ -0.82
GPNMB-202ENST00000381990 TATDN1Q6P1N9 297 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 PRMT6Q96LA8 375 aaPredicted RBP9.94□□□□□ -0.82
GPNMB-202ENST00000381990 GMLQ99445 158 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 VAT1LQ9HCJ6 419 aa9.94□□□□□ -0.82
GPNMB-202ENST00000381990 LUC7L2Q9Y383 392 aaKnown RBP9.94□□□□□ -0.82
GPNMB-202ENST00000381990 ATXN2Q99700 1313 aaKnown RBP9.93□□□□□ -0.82
GPNMB-202ENST00000381990 EBAG9O00559 213 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 TFRCP02786 760 aaKnown RBP9.93□□□□□ -0.82
GPNMB-202ENST00000381990 USP8P40818 1118 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 PPFIA1Q13136 1202 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 ZNF658Q5TYW1 1059 aaPredicted RBP9.93□□□□□ -0.82
GPNMB-202ENST00000381990 KRT25Q7Z3Z0 450 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 CCDC125Q86Z20 511 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 ZFP91Q96JP5 570 aaPredicted RBP9.93□□□□□ -0.82
GPNMB-202ENST00000381990 CEP89Q96ST8 783 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 KANSL2Q9H9L4 492 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 ZNF277Q9NRM2 450 aaPredicted RBP9.93□□□□□ -0.82
GPNMB-202ENST00000381990 NYAP2Q9P242 653 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 FAM184BQ9ULE4 1060 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 GOLGA6CA6NDK9 693 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 GOLGA6BA6NDN3 693 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 SMCO2A6NFE2 343 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 FAM196BA6NMK8 535 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 GTPBP6O43824 516 aaPredicted RBP9.93□□□□□ -0.82
GPNMB-202ENST00000381990 RAD17O75943 681 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 IPO7O95373 1038 aaKnown RBP9.93□□□□□ -0.82
GPNMB-202ENST00000381990 GOLGA6DP0CG33 693 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 SLURP2P0DP57 97 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 EEF1GP26641 437 aaKnown RBP9.93□□□□□ -0.82
GPNMB-202ENST00000381990 TGFB2P61812 414 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 ATP2B2Q01814 1243 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 UBXN1Q04323 297 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 CCDC122Q5T0U0 273 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 RRAGBQ5VZM2 374 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 CCNI2Q6ZMN8 369 aaPredicted RBP9.93□□□□□ -0.82
GPNMB-202ENST00000381990 POTEDQ86YR6 584 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 CCDC170Q8IYT3 715 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 MKL1Q969V6 931 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 JAKMIP2Q96AA8 810 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 MMS19Q96T76 1030 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 SELENOOQ9BVL4 669 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 VPS16Q9H269 839 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 GPCPD1Q9NPB8 672 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 GOLGA6AQ9NYA3 693 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 TMOD2Q9NZR1 351 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 HDAC9Q9UKV0 1011 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 CAPN11Q9UMQ6 739 aa9.93□□□□□ -0.82
GPNMB-202ENST00000381990 REXO2Q9Y3B8 237 aaKnown RBP9.93□□□□□ -0.82
GPNMB-202ENST00000381990 SPDYE2BA6NHP3 402 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 GOLGA8KD6RF30 607 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 SPDYE6P0CI01 402 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 CYLC1P35663 651 aaPredicted RBP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 GGCXP38435 758 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 E2F4Q16254 413 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 MEA1Q16626 185 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 INF2Q27J81 1249 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 TMEM179Q6ZVK1 233 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 SMYD4Q8IYR2 804 aaPredicted RBP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 C4orf32Q8N8J7 132 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 RETREG2Q8NC44 543 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 NCAPGQ9BPX3 1015 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 TSGA10Q9BZW7 698 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 PIM2Q9P1W9 311 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 COL4A5P29400 1685 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 SHTN1A0MZ66 631 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 LGALS16A8MUM7 142 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 ERLIN2O94905 339 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 ATP1A1P05023 1023 aaKnown RBP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 NIM1KQ8IY84 436 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms