RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 FCHSD1Q86WN1 690 aa27.55■■■□□ 2
CDKN2A-203ENST00000380151 SAMD3Q8N6K7 520 aa27.55■■■□□ 2
CDKN2A-203ENST00000380151 COL6A3P12111 3177 aa27.54■■■□□ 2
CDKN2A-203ENST00000380151 MMP3P08254 477 aa27.54■■■□□ 2
CDKN2A-203ENST00000380151 LIFRP42702 1097 aa27.54■■■□□ 2
CDKN2A-203ENST00000380151 CCL23P55773 120 aa27.54■■■□□ 2
CDKN2A-203ENST00000380151 PGM5Q15124 567 aa27.54■■■□□ 2
CDKN2A-203ENST00000380151 TMEM240Q5SV17 173 aa27.54■■■□□ 2
CDKN2A-203ENST00000380151 RNF20Q5VTR2 975 aa27.54■■■□□ 2
CDKN2A-203ENST00000380151 TMTC2Q8N394 836 aa27.54■■■□□ 2
CDKN2A-203ENST00000380151 RRP36Q96EU6 259 aaKnown RBP27.54■■■□□ 2
CDKN2A-203ENST00000380151 DDX41Q9UJV9 622 aaKnown RBP27.54■■■□□ 2
CDKN2A-203ENST00000380151 RGS20O76081 388 aa27.53■■■□□ 2
CDKN2A-203ENST00000380151 CYP2C9P11712 490 aa27.53■■■□□ 2
CDKN2A-203ENST00000380151 CHMP4BP1P59074 171 aa27.53■■■□□ 2
CDKN2A-203ENST00000380151 WNT8AQ9H1J5 351 aa27.53■■■□□ 2
CDKN2A-203ENST00000380151 PSRC1Q6PGN9 363 aaPredicted RBP27.52■■■□□ 2
CDKN2A-203ENST00000380151 CMTR1Q8N1G2 835 aaKnown RBP27.52■■■□□ 2
CDKN2A-203ENST00000380151 SRBD1Q8N5C6 995 aaKnown RBP27.52■■■□□ 2
CDKN2A-203ENST00000380151 ZFP91Q96JP5 570 aaPredicted RBP27.52■■■□□ 2
CDKN2A-203ENST00000380151 GUCD1Q96NT3 240 aa27.52■■■□□ 2
CDKN2A-203ENST00000380151 LZTS2Q9BRK4 669 aa27.52■■■□□ 2
CDKN2A-203ENST00000380151 IL23AQ9NPF7 189 aa27.52■■■□□ 2
CDKN2A-203ENST00000380151 SEC63Q9UGP8 760 aaKnown RBP27.52■■■□□ 2
CDKN2A-203ENST00000380151 SLC12A7Q9Y666 1083 aa27.52■■■□□ 2
CDKN2A-203ENST00000380151 CCND2P30279 289 aa27.51■■□□□ 1.99
CDKN2A-203ENST00000380151 GNAQP50148 359 aa27.51■■□□□ 1.99
CDKN2A-203ENST00000380151 NFRKBQ6P4R8 1299 aa27.51■■□□□ 1.99
CDKN2A-203ENST00000380151 ZNF365Q70YC5 407 aa27.51■■□□□ 1.99
CDKN2A-203ENST00000380151 VSIG10LQ86VR7 867 aa27.51■■□□□ 1.99
CDKN2A-203ENST00000380151 STXBP5LQ9Y2K9 1186 aa27.51■■□□□ 1.99
CDKN2A-203ENST00000380151 SUPT20HL2P0C7V6 817 aa27.5■■□□□ 1.99
CDKN2A-203ENST00000380151 CALM1P0DP23 149 aa27.5■■□□□ 1.99
CDKN2A-203ENST00000380151 CALM2P0DP24 149 aa27.5■■□□□ 1.99
CDKN2A-203ENST00000380151 CALM3P0DP25 149 aa27.5■■□□□ 1.99
CDKN2A-203ENST00000380151 MICU3Q86XE3 530 aa27.5■■□□□ 1.99
CDKN2A-203ENST00000380151 TCEANC2Q96MN5 208 aa27.5■■□□□ 1.99
CDKN2A-203ENST00000380151 NEK1Q96PY6 1258 aa27.5■■□□□ 1.99
CDKN2A-203ENST00000380151 SORBS3O60504 671 aa27.49■■□□□ 1.99
CDKN2A-203ENST00000380151 SMARCA1P28370 1054 aa27.49■■□□□ 1.99
CDKN2A-203ENST00000380151 RASEFQ8IZ41 740 aa27.49■■□□□ 1.99
CDKN2A-203ENST00000380151 EMID1Q96A84 441 aaPredicted RBP27.49■■□□□ 1.99
CDKN2A-203ENST00000380151 SCLYQ96I15 445 aa27.49■■□□□ 1.99
CDKN2A-203ENST00000380151 FRMPD4Q14CM0 1322 aa27.48■■□□□ 1.99
CDKN2A-203ENST00000380151 LAMC2Q13753 1193 aa27.48■■□□□ 1.99
CDKN2A-203ENST00000380151 DGKDQ16760 1214 aa27.48■■□□□ 1.99
CDKN2A-203ENST00000380151 SGMS1Q86VZ5 419 aa27.48■■□□□ 1.99
CDKN2A-203ENST00000380151 DHX37Q8IY37 1157 aaKnown RBP27.48■■□□□ 1.99
CDKN2A-203ENST00000380151 PPTC7Q8NI37 304 aa27.48■■□□□ 1.99
CDKN2A-203ENST00000380151 KAT2BQ92831 832 aa27.48■■□□□ 1.99
CDKN2A-203ENST00000380151 GPKOWQ92917 476 aaPredicted RBP eCLIP27.48■■□□□ 1.99
CDKN2A-203ENST00000380151 TTYH1Q9H313 450 aaPredicted RBP27.48■■□□□ 1.99
CDKN2A-203ENST00000380151 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 hCG_1642624A0A1W2PR95 340 aa27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 CASTP20810 708 aaKnown RBP27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 UBA1P22314 1058 aaKnown RBP27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 PTPN11Q06124 597 aaPredicted RBP27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 ADCK5Q3MIX3 580 aa27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 RASIP1Q5U651 963 aa27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 USP17L6PQ6QN14 398 aa27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 TMTC3Q6ZXV5 915 aa27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 CCDC82Q8N4S0 544 aa27.47■■□□□ 1.99
CDKN2A-203ENST00000380151 GGPS1O95749 300 aa27.46■■□□□ 1.99
CDKN2A-203ENST00000380151 ZNF286BP0CG31 522 aa27.46■■□□□ 1.99
CDKN2A-203ENST00000380151 KCNV1Q6PIU1 500 aa27.46■■□□□ 1.99
CDKN2A-203ENST00000380151 FANCBQ8NB91 859 aa27.46■■□□□ 1.99
CDKN2A-203ENST00000380151 SMARCC2Q8TAQ2 1214 aa27.46■■□□□ 1.99
CDKN2A-203ENST00000380151 CUL5Q93034 780 aa27.46■■□□□ 1.99
CDKN2A-203ENST00000380151 SEMA6BQ9H3T3 888 aa27.46■■□□□ 1.99
CDKN2A-203ENST00000380151 NOD1Q9Y239 953 aa27.46■■□□□ 1.99
CDKN2A-203ENST00000380151 DNAJB2P25686 324 aa27.45■■□□□ 1.98
CDKN2A-203ENST00000380151 SP2Q02086 613 aa27.45■■□□□ 1.98
CDKN2A-203ENST00000380151 CELF3Q5SZQ8 465 aaKnown RBP27.45■■□□□ 1.98
CDKN2A-203ENST00000380151 APOA5Q6Q788 366 aa27.45■■□□□ 1.98
CDKN2A-203ENST00000380151 SYNE3Q6ZMZ3 975 aa27.45■■□□□ 1.98
CDKN2A-203ENST00000380151 HERVK_113Q902F9 699 aa27.45■■□□□ 1.98
CDKN2A-203ENST00000380151 SPATA33Q96N06 139 aa27.45■■□□□ 1.98
CDKN2A-203ENST00000380151 CXXC1Q9P0U4 656 aaPredicted RBP27.45■■□□□ 1.98
CDKN2A-203ENST00000380151 GRXCR1A8MXD5 290 aa27.44■■□□□ 1.98
CDKN2A-203ENST00000380151 FGBP02675 491 aa27.44■■□□□ 1.98
CDKN2A-203ENST00000380151 MRPS9P82933 396 aaKnown RBP27.44■■□□□ 1.98
CDKN2A-203ENST00000380151 EXOSC10Q01780 885 aaKnown RBP27.44■■□□□ 1.98
CDKN2A-203ENST00000380151 TSGA10IPQ3SY00 556 aa27.44■■□□□ 1.98
CDKN2A-203ENST00000380151 MYSM1Q5VVJ2 828 aa27.44■■□□□ 1.98
CDKN2A-203ENST00000380151 DHX32Q7L7V1 743 aaKnown RBP27.44■■□□□ 1.98
CDKN2A-203ENST00000380151 OTOP2Q7RTS6 562 aa27.44■■□□□ 1.98
CDKN2A-203ENST00000380151 MEIS2O14770 477 aa27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 F2P00734 622 aa27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 PSEN2P49810 448 aa27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 KRT32Q14532 448 aa27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 PTGISQ16647 500 aa27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 HSDL1Q3SXM5 330 aa27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 GDF6Q6KF10 455 aaPredicted RBP27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 VWCEQ96DN2 955 aa27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 CDX2Q99626 313 aaPredicted RBP27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 MTIF3Q9H2K0 278 aaKnown RBP27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 CDH23Q9H251 3354 aa27.43■■□□□ 1.98
CDKN2A-203ENST00000380151 TMEM265A0A087WTH1 108 aa27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 PIK3CDO00329 1044 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms