RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 B4DLN1 442 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 SHOX2O60902 331 aaPredicted RBP8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 ENTPD3O75355 529 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 EIF3JO75822 258 aaKnown RBP8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 ALDH1A1P00352 501 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 ICE2Q659A1 982 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 KCNK18Q7Z418 384 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 CPNE8Q86YQ8 564 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 APPBP2Q92624 585 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 MACROD2A1Z1Q3 448 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 SPDYE2BA6NHP3 402 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 EIF4E1BA6NMX2 242 aaKnown RBP8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 SPDYE6P0CI01 402 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 PDHBP11177 359 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 HNRNPH1P31943 449 aaKnown RBP8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 DNA2P51530 1060 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 DEFB115Q30KQ5 88 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 FAM47AQ5JRC9 791 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 AKR1B15C9JRZ8 316 aaPredicted RBP8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 MATR3P43243 847 aaKnown RBP eCLIP8.23□□□□□ -1.092e-6■■■■□ 20.7
GPCPD1-201ENST00000379019 TROAPQ12815 778 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 RCSD1Q6JBY9 416 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 GOLGA1Q92805 767 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 ZNF396Q96N95 335 aaPredicted RBP8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 GBA2Q9HCG7 927 aaPredicted RBP8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 GTF2IP78347 998 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 UAP1Q16222 522 aaPredicted RBP8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 RBM12Q9NTZ6 932 aaKnown RBP8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 COPB2P35606 906 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 USP14P54578 494 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 SREBF2Q12772 1141 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 SGMS1Q86VZ5 419 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 NCOA7Q8NI08 942 aa8.23□□□□□ -1.09
GPCPD1-201ENST00000379019 GAKO14976 1311 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 LRRC10BA6NIK2 292 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 NDUFA10O95299 355 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 FMNL1O95466 1100 aaPredicted RBP8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 PLCD1P51178 756 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 MAEAQ7L5Y9 396 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 DNAJC5GQ8N7S2 189 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 AENQ8WTP8 325 aaKnown RBP8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 SH3GL2Q99962 352 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 RPS6KA5O75582 802 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 APPP05067 770 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 KRT9P35527 623 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 IREB2P48200 963 aaKnown RBP8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 AKAP17AQ02040 695 aaKnown RBP8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 CLEC10AQ8IUN9 316 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 RNPC3Q96LT9 517 aaKnown RBP8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 OSBPL7Q9BZF2 842 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 SRPRBQ9Y5M8 271 aaKnown RBP8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 V9GY48 417 aaPredicted RBP8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 SYNRGQ9UMZ2 1314 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 HIP1O00291 1037 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 ACTN3Q08043 901 aaPredicted RBP8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 MFSD14BQ5SR56 506 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 GPATCH11Q8N954 259 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 SLC44A5Q8NCS7 719 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 KIAA0895Q8NCT3 520 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 MYO6Q9UM54 1294 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 SCN9AQ15858 1988 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 CCDC189A1A4V9 331 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 MOCS3O95396 460 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 LDHBP07195 334 aaKnown RBP8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 CHRM1P11229 460 aaPredicted RBP8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 ACCSLQ4AC99 568 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 TMEM67Q5HYA8 995 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 NUP133Q8WUM0 1156 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 PHF20Q9BVI0 1012 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 MXD3Q9BW11 206 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 PSD3Q9NYI0 1048 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 VPS13AQ96RL7 3174 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 FLT1P17948 1338 aa8.22□□□□□ -1.09
GPCPD1-201ENST00000379019 CCDC66A2RUB6 948 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 ZBTB43O43298 467 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 GUCY2CP25092 1073 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 TMOD1P28289 359 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 CDCA5Q96FF9 252 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 ZIM3Q96PE6 472 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 MMTAG2Q9BU76 263 aaKnown RBP8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 IL17RBQ9NRM6 502 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 TRIOO75962 3097 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 M0R2N6 131 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 PPP1R12BO60237 982 aaPredicted RBP8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 AARSP49588 968 aaKnown RBP eCLIP8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 CTCFP49711 727 aaPredicted RBP8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 ARHGEF6Q15052 776 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 TCP11X2Q5H9J9 407 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 HAUS3Q68CZ6 603 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 SYNE3Q6ZMZ3 975 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 BRAPQ7Z569 592 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 LRWD1Q9UFC0 647 aa8.21□□□□□ -1.09
GPCPD1-201ENST00000379019 CRKP46108 304 aa8.21□□□□□ -1.1
GPCPD1-201ENST00000379019 DPY19L2P1Q6NXN4 242 aa8.21□□□□□ -1.1
GPCPD1-201ENST00000379019 CCNI2Q6ZMN8 369 aaPredicted RBP8.21□□□□□ -1.1
GPCPD1-201ENST00000379019 TRPM4Q8TD43 1214 aa8.21□□□□□ -1.1
GPCPD1-201ENST00000379019 GGA3Q9NZ52 723 aa8.21□□□□□ -1.1
GPCPD1-201ENST00000379019 GOLGA8AA7E2F4 631 aa8.21□□□□□ -1.1
GPCPD1-201ENST00000379019 CAVIN2O95810 425 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms