RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ARMCX5Q6P1M9 558 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 TMC6Q7Z403 805 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 TEX2Q8IWB9 1127 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 SLF1Q9BQI6 1058 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 KCNMB3Q9NPA1 279 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 NFE2L3Q9Y4A8 694 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 GRB10Q13322 594 aa21.77■■□□□ 1.08
SSU72-204ENST00000378726 MTMR2Q13614 643 aa21.77■■□□□ 1.08
SSU72-204ENST00000378726 PRR16Q569H4 304 aa21.77■■□□□ 1.08
SSU72-204ENST00000378726 E4F1Q66K89 784 aaPredicted RBP21.77■■□□□ 1.08
SSU72-204ENST00000378726 CDK5RAP3Q96JB5 506 aa21.77■■□□□ 1.08
SSU72-204ENST00000378726 NUDT12Q9BQG2 462 aa21.77■■□□□ 1.08
SSU72-204ENST00000378726 PICK1Q9NRD5 415 aa21.77■■□□□ 1.08
SSU72-204ENST00000378726 EMILIN3Q9NT22 766 aa21.77■■□□□ 1.08
SSU72-204ENST00000378726 SMCHD1A6NHR9 2005 aa21.77■■□□□ 1.08
SSU72-204ENST00000378726 KIF18AQ8NI77 898 aa21.76■■□□□ 1.07
SSU72-204ENST00000378726 SNX29Q8TEQ0 813 aa21.76■■□□□ 1.07
SSU72-204ENST00000378726 PNMA5Q96PV4 448 aa21.76■■□□□ 1.07
SSU72-204ENST00000378726 PPP2R3BQ9Y5P8 575 aa21.76■■□□□ 1.07
SSU72-204ENST00000378726 SERPINC1P01008 464 aa21.76■■□□□ 1.07
SSU72-204ENST00000378726 USP14P54578 494 aa21.76■■□□□ 1.07
SSU72-204ENST00000378726 Q4G0T1 1027 aa21.76■■□□□ 1.07
SSU72-204ENST00000378726 ZNF658Q5TYW1 1059 aaPredicted RBP21.76■■□□□ 1.07
SSU72-204ENST00000378726 AGBL1Q96MI9 1066 aa21.76■■□□□ 1.07
SSU72-204ENST00000378726 WDR18Q9BV38 432 aa21.76■■□□□ 1.07
SSU72-204ENST00000378726 TANGO6Q9C0B7 1094 aa21.76■■□□□ 1.07
SSU72-204ENST00000378726 ATAD5Q96QE3 1844 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 ABCB11O95342 1321 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 KIF20AO95235 890 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 YBX3P16989 372 aaKnown RBP eCLIP21.75■■□□□ 1.074e-8■■□□□ 12.1
SSU72-204ENST00000378726 PTPRAP18433 802 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 BACE1P56817 501 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 STX17P56962 302 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 AMPD3Q01432 767 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 DHX8Q14562 1220 aaKnown RBP21.75■■□□□ 1.07
SSU72-204ENST00000378726 KMT5BQ4FZB7 885 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 AS3MTQ9HBK9 375 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 DICER1Q9UPY3 1922 aaKnown RBP21.75■■□□□ 1.07
SSU72-204ENST00000378726 FAM86B1E9PN63 330 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 ICAM1P05362 532 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 FAM86B2P0C5J1 330 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 VCAM1P19320 739 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 CIITAP33076 1130 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 ZNF76P36508 570 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 UBASH3AP57075 661 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 SUPT20HL1Q3ZLR7 823 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 HSP90AA4PQ58FG1 418 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 SLFN12Q8IYM2 578 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 KLRG1Q96E93 195 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 CCPG1Q9ULG6 757 aa21.75■■□□□ 1.07
SSU72-204ENST00000378726 ZNF536O15090 1300 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 KLRC4O43908 158 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 CYP3A4P08684 503 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 CDK11BP21127 795 aaKnown RBP21.74■■□□□ 1.07
SSU72-204ENST00000378726 KCNB1Q14721 858 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 SV2BQ7L1I2 683 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 ZNF280CQ8ND82 737 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 ERO1AQ96HE7 468 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 C7orf25Q9BPX7 421 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 BLOC1S4Q9NUP1 217 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 ZHX2Q9Y6X8 837 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 FLOT1O75955 427 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 ELF2Q15723 593 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 SPATA1Q5VX52 437 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 CCDC150Q8NCX0 1101 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 ZNF397Q8NF99 534 aaPredicted RBP21.74■■□□□ 1.07
SSU72-204ENST00000378726 PPP1R13BQ96KQ4 1090 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 TRIM9Q9C026 710 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 ADARB2Q9NS39 739 aaKnown RBP21.74■■□□□ 1.07
SSU72-204ENST00000378726 SAMSN1Q9NSI8 373 aaKnown RBP21.74■■□□□ 1.07
SSU72-204ENST00000378726 STK17AQ9UEE5 414 aa21.74■■□□□ 1.07
SSU72-204ENST00000378726 SBF1O95248 1867 aa21.73■■□□□ 1.07
SSU72-204ENST00000378726 TBX3O15119 743 aa21.73■■□□□ 1.07
SSU72-204ENST00000378726 ZNF18P17022 549 aa21.73■■□□□ 1.07
SSU72-204ENST00000378726 CPXCR1Q8N123 301 aa21.73■■□□□ 1.07
SSU72-204ENST00000378726 CYP2W1Q8TAV3 490 aa21.73■■□□□ 1.07
SSU72-204ENST00000378726 ETNPPLQ8TBG4 499 aa21.73■■□□□ 1.07
SSU72-204ENST00000378726 LENG9Q96B70 501 aa21.73■■□□□ 1.07
SSU72-204ENST00000378726 RPAP3Q9H6T3 665 aaPredicted RBP21.73■■□□□ 1.07
SSU72-204ENST00000378726 SLU7O95391 586 aaKnown RBP21.72■■□□□ 1.07
SSU72-204ENST00000378726 PRKG1Q13976 671 aa21.72■■□□□ 1.07
SSU72-204ENST00000378726 GDAQ9Y2T3 454 aa21.72■■□□□ 1.07
SSU72-204ENST00000378726 CBFA2T2O43439 604 aa21.72■■□□□ 1.07
SSU72-204ENST00000378726 RHOBTB3O94955 611 aa21.72■■□□□ 1.07
SSU72-204ENST00000378726 SEMA3FQ13275 785 aa21.72■■□□□ 1.07
SSU72-204ENST00000378726 MCM6Q14566 821 aa21.72■■□□□ 1.07
SSU72-204ENST00000378726 ECM1Q16610 540 aa21.72■■□□□ 1.07
SSU72-204ENST00000378726 C9orf131Q5VYM1 1079 aa21.72■■□□□ 1.07
SSU72-204ENST00000378726 LARP4BQ92615 738 aaKnown RBP21.72■■□□□ 1.07
SSU72-204ENST00000378726 FAM20AQ96MK3 541 aa21.72■■□□□ 1.07
SSU72-204ENST00000378726 SLC38A10Q9HBR0 1119 aa21.72■■□□□ 1.07
SSU72-204ENST00000378726 KIF2AO00139 706 aaPredicted RBP21.71■■□□□ 1.07
SSU72-204ENST00000378726 SFPQP23246 707 aaKnown RBP eCLIP21.71■■□□□ 1.07
SSU72-204ENST00000378726 PRCPP42785 496 aa21.71■■□□□ 1.07
SSU72-204ENST00000378726 TMEM119Q4V9L6 283 aa21.71■■□□□ 1.07
SSU72-204ENST00000378726 RAVER2Q9HCJ3 691 aaKnown RBP21.71■■□□□ 1.07
SSU72-204ENST00000378726 PPP1R9AQ9ULJ8 1098 aa21.71■■□□□ 1.07
SSU72-204ENST00000378726 MAPK8IP1Q9UQF2 711 aa21.71■■□□□ 1.07
SSU72-204ENST00000378726 PITPNM2Q9BZ72 1349 aa21.71■■□□□ 1.07
SSU72-204ENST00000378726 SYNRGQ9UMZ2 1314 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms