RNA–Protein interactions for RNA: ENST00000378206.5

DFFB-204, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-204ENST00000378206 CCDC47Q96A33 483 aaKnown RBP16.76■□□□□ 0.27
DFFB-204ENST00000378206 LRRC53A6NM62 1247 aa16.76■□□□□ 0.27
DFFB-204ENST00000378206 PSMD14O00487 310 aa16.76■□□□□ 0.27
DFFB-204ENST00000378206 VWA3BQ502W6 1294 aa16.76■□□□□ 0.27
DFFB-204ENST00000378206 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
DFFB-204ENST00000378206 BUB1O43683 1085 aa16.75■□□□□ 0.27
DFFB-204ENST00000378206 GFPT1Q06210 699 aaPredicted RBP16.75■□□□□ 0.27
DFFB-204ENST00000378206 GABPAQ06546 454 aa16.75■□□□□ 0.27
DFFB-204ENST00000378206 KRT79Q5XKE5 535 aa16.75■□□□□ 0.27
DFFB-204ENST00000378206 FNBP4Q8N3X1 1017 aaPredicted RBP16.75■□□□□ 0.27
DFFB-204ENST00000378206 CAGE1Q8TC20 777 aa16.75■□□□□ 0.27
DFFB-204ENST00000378206 DBNDD1Q9H9R9 158 aa16.75■□□□□ 0.27
DFFB-204ENST00000378206 DDX25Q9UHL0 483 aaKnown RBP16.75■□□□□ 0.27
DFFB-204ENST00000378206 MEIS1O00470 390 aa16.75■□□□□ 0.27
DFFB-204ENST00000378206 KRT86O43790 486 aa16.75■□□□□ 0.27
DFFB-204ENST00000378206 SHMT1P34896 483 aa16.75■□□□□ 0.27
DFFB-204ENST00000378206 HDXQ7Z353 690 aa16.75■□□□□ 0.27
DFFB-204ENST00000378206 KIAA1024Q9UPX6 916 aa16.75■□□□□ 0.27
DFFB-204ENST00000378206 TRAF5O00463 557 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 TRIM37O94972 964 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 IPO7O95373 1038 aaKnown RBP16.74■□□□□ 0.27
DFFB-204ENST00000378206 MYL1P05976 194 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 CYLC1P35663 651 aaPredicted RBP16.74■□□□□ 0.27
DFFB-204ENST00000378206 TNNT3P45378 269 aaPredicted RBP16.74■□□□□ 0.27
DFFB-204ENST00000378206 KRT83P78385 493 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 SLC7A5Q01650 507 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 ZNF543Q08ER8 600 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 KIAA0825Q8IV33 1275 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 SEPT12Q8IYM1 358 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 RAD54LQ92698 747 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 P2RX7Q99572 595 aaKnown RBP16.74■□□□□ 0.27
DFFB-204ENST00000378206 PSTPIP2Q9H939 334 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 PCDHA12Q9UN75 941 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 SIK3Q9Y2K2 1263 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 POTEB3A0JP26 581 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 POTECB2RU33 542 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 ATP8B1O43520 1251 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 PLCG2P16885 1265 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 FAM193AP78312 1265 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 KIF5AQ12840 1032 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 PTPROQ16827 1216 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 CDC42EP5Q6NZY7 148 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 POTEBQ6S5H4 581 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 IFIH1Q9BYX4 1025 aaKnown RBP16.74■□□□□ 0.27
DFFB-204ENST00000378206 ZC3H12CQ9C0D7 883 aaKnown RBP16.74■□□□□ 0.27
DFFB-204ENST00000378206 CUEDC2Q9H467 287 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 DEF6Q9H4E7 631 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 MYO1AQ9UBC5 1043 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 GAKO14976 1311 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 AKR1B10O60218 316 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 BBOX1O75936 387 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 TTLL1O95922 423 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 RNASE9P60153 205 aaKnown RBP16.74■□□□□ 0.27
DFFB-204ENST00000378206 NFRKBQ6P4R8 1299 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 UNC13DQ70J99 1090 aa16.74■□□□□ 0.27
DFFB-204ENST00000378206 ZSCAN29Q8IWY8 852 aaPredicted RBP16.74■□□□□ 0.27
DFFB-204ENST00000378206 FAM163AQ96GL9 167 aaPredicted RBP16.74■□□□□ 0.27
DFFB-204ENST00000378206 LAMB1P07942 1786 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 PCNTO95613 3336 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 RASSF7Q02833 373 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 TMEM266Q2M3C6 531 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 GJD4Q96KN9 370 aaPredicted RBP16.73■□□□□ 0.27
DFFB-204ENST00000378206 ERGIC2Q96RQ1 377 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 PCDHA13Q9Y5I0 950 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 MYH10P35580 1976 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 PNMA6FA0A0J9YX94 578 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 EIF3CLB5ME19 914 aaKnown RBP16.73■□□□□ 0.27
DFFB-204ENST00000378206 KIF11P52732 1056 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 PSMC6P62333 389 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 KCNMA1Q12791 1236 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 SPA17Q15506 151 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 DDX60LQ5H9U9 1706 aaKnown RBP16.73■□□□□ 0.27
DFFB-204ENST00000378206 LRRC55Q6ZSA7 311 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 C15orf52Q6ZUT6 534 aaKnown RBP16.73■□□□□ 0.27
DFFB-204ENST00000378206 DNAJC19Q96DA6 116 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 EIF3CQ99613 913 aaKnown RBP16.73■□□□□ 0.27
DFFB-204ENST00000378206 PLAGL2Q9UPG8 496 aa16.73■□□□□ 0.27
DFFB-204ENST00000378206 RBM5P52756 815 aaKnown RBP eCLIP16.72■□□□□ 0.27
DFFB-204ENST00000378206 USP14P54578 494 aa16.72■□□□□ 0.27
DFFB-204ENST00000378206 PAPD7Q5XG87 772 aaKnown RBP16.72■□□□□ 0.27
DFFB-204ENST00000378206 CERKQ8TCT0 537 aa16.72■□□□□ 0.27
DFFB-204ENST00000378206 HNRNPLLQ8WVV9 542 aaKnown RBP16.72■□□□□ 0.27
DFFB-204ENST00000378206 IKZF4Q9H2S9 585 aa16.72■□□□□ 0.27
DFFB-204ENST00000378206 DNAJC18Q9H819 358 aa16.72■□□□□ 0.27
DFFB-204ENST00000378206 BTAF1O14981 1849 aa16.72■□□□□ 0.27
DFFB-204ENST00000378206 FXR2P51116 673 aaKnown RBP eCLIP16.72■□□□□ 0.27
DFFB-204ENST00000378206 NAP1L1P55209 391 aaKnown RBP16.72■□□□□ 0.27
DFFB-204ENST00000378206 COASYQ13057 564 aa16.72■□□□□ 0.27
DFFB-204ENST00000378206 USH1GQ495M9 461 aa16.72■□□□□ 0.27
DFFB-204ENST00000378206 SAMD1Q6SPF0 538 aaPredicted RBP16.72■□□□□ 0.27
DFFB-204ENST00000378206 NOC3LQ8WTT2 800 aaKnown RBP16.72■□□□□ 0.27
DFFB-204ENST00000378206 SECISBP2LQ93073 1101 aaKnown RBP16.72■□□□□ 0.27
DFFB-204ENST00000378206 MS4A14Q96JA4 679 aa16.72■□□□□ 0.27
DFFB-204ENST00000378206 POLRMTO00411 1230 aaKnown RBP16.71■□□□□ 0.27
DFFB-204ENST00000378206 PPEF1O14829 653 aaPredicted RBP16.71■□□□□ 0.27
DFFB-204ENST00000378206 ERLIN1O75477 346 aa16.71■□□□□ 0.27
DFFB-204ENST00000378206 APOBEC3HQ6NTF7 200 aaKnown RBP16.71■□□□□ 0.27
DFFB-204ENST00000378206 FOXR1Q6PIV2 292 aa16.71■□□□□ 0.27
DFFB-204ENST00000378206 FAM114A1Q8IWE2 563 aa16.71■□□□□ 0.27
DFFB-204ENST00000378206 CYP2W1Q8TAV3 490 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms