RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 CHST13Q8NET6 341 aa23.82■■□□□ 1.4
RNF38-205ENST00000377877 RBBP6Q7Z6E9 1792 aaKnown RBP23.81■■□□□ 1.4
RNF38-205ENST00000377877 POLR2DO15514 142 aaKnown RBP23.81■■□□□ 1.4
RNF38-205ENST00000377877 KINO60870 393 aaKnown RBP23.81■■□□□ 1.4
RNF38-205ENST00000377877 TOMM70O94826 608 aa23.81■■□□□ 1.4
RNF38-205ENST00000377877 NCAPG2Q86XI2 1143 aa23.81■■□□□ 1.4
RNF38-205ENST00000377877 RMDN3Q96TC7 470 aa23.81■■□□□ 1.4
RNF38-205ENST00000377877 KCNMB3Q9NPA1 279 aa23.81■■□□□ 1.4
RNF38-205ENST00000377877 SLC45A1Q9Y2W3 748 aa23.81■■□□□ 1.4
RNF38-205ENST00000377877 ERCC3P19447 782 aa23.8■■□□□ 1.4
RNF38-205ENST00000377877 EIF2AK2P19525 551 aaKnown RBP23.8■■□□□ 1.4
RNF38-205ENST00000377877 CKAP2LQ8IYA6 745 aa23.8■■□□□ 1.4
RNF38-205ENST00000377877 TNMDQ9H2S6 317 aa23.8■■□□□ 1.4
RNF38-205ENST00000377877 EHMT1Q9H9B1 1298 aa23.8■■□□□ 1.4
RNF38-205ENST00000377877 PNMA3Q9UL41 463 aa23.8■■□□□ 1.4
RNF38-205ENST00000377877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.8■■□□□ 1.4
RNF38-205ENST00000377877 TESPA1A2RU30 521 aaPredicted RBP23.8■■□□□ 1.4
RNF38-205ENST00000377877 PDLIM2Q96JY6 352 aa23.8■■□□□ 1.4
RNF38-205ENST00000377877 TTC12Q9H892 705 aaPredicted RBP23.8■■□□□ 1.4
RNF38-205ENST00000377877 MRPS9P82933 396 aaKnown RBP23.79■■□□□ 1.4
RNF38-205ENST00000377877 IGSF22Q8N9C0 903 aa23.79■■□□□ 1.4
RNF38-205ENST00000377877 ETNPPLQ8TBG4 499 aa23.79■■□□□ 1.4
RNF38-205ENST00000377877 ERCC4Q92889 916 aaPredicted RBP23.79■■□□□ 1.4
RNF38-205ENST00000377877 PXMP2Q9NR77 195 aa23.79■■□□□ 1.4
RNF38-205ENST00000377877 ABT1Q9ULW3 272 aaKnown RBP23.79■■□□□ 1.4
RNF38-205ENST00000377877 MSH4O15457 936 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 PGM5Q15124 567 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 SMCR8Q8TEV9 937 aaPredicted RBP23.78■■□□□ 1.4
RNF38-205ENST00000377877 FRMPD4Q14CM0 1322 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 FAM155AB1AL88 458 aaPredicted RBP23.78■■□□□ 1.4
RNF38-205ENST00000377877 MARCH6O60337 910 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 SLC10A3P09131 477 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 MSNP26038 577 aaKnown RBP23.78■■□□□ 1.4
RNF38-205ENST00000377877 FXR2P51116 673 aaKnown RBP eCLIP23.78■■□□□ 1.4
RNF38-205ENST00000377877 ERVK-9P63128 1117 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 ERVK-24P63145 666 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 CNTN2Q02246 1040 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 CEP55Q53EZ4 464 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 ANKRD35Q8N283 1001 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 SDF4Q9BRK5 362 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 PDCD2LQ9BRP1 358 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 SERTAD1Q9UHV2 236 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 PCDHA12Q9UN75 941 aa23.78■■□□□ 1.4
RNF38-205ENST00000377877 TMEM88BA6NKF7 163 aa23.77■■□□□ 1.4
RNF38-205ENST00000377877 IGF2BP3O00425 579 aaKnown RBP eCLIP23.77■■□□□ 1.4
RNF38-205ENST00000377877 MEIS1O00470 390 aa23.77■■□□□ 1.4
RNF38-205ENST00000377877 ARP10275 920 aa23.77■■□□□ 1.4
RNF38-205ENST00000377877 ITGB5P18084 799 aa23.77■■□□□ 1.4
RNF38-205ENST00000377877 ARHGEF16Q5VV41 709 aa23.77■■□□□ 1.4
RNF38-205ENST00000377877 PLA2G4DQ86XP0 818 aa23.77■■□□□ 1.4
RNF38-205ENST00000377877 ANKRD13CQ8N6S4 541 aa23.77■■□□□ 1.4
RNF38-205ENST00000377877 POTEMA6NI47 508 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 MYCLP12524 364 aaPredicted RBP23.76■■□□□ 1.39
RNF38-205ENST00000377877 PCNX4Q63HM2 1172 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 KRBA2Q6ZNG9 492 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 RBM43Q6ZSC3 357 aaKnown RBP23.76■■□□□ 1.39
RNF38-205ENST00000377877 TIGD1Q96MW7 591 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 MXRA8Q9BRK3 442 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 MMTAG2Q9BU76 263 aaKnown RBP23.76■■□□□ 1.39
RNF38-205ENST00000377877 PORCNQ9H237 461 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 FBXO40Q9UH90 709 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 LCTP09848 1927 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 SLC25A27O95847 323 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 PDIA5Q14554 519 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 KARSQ15046 597 aaKnown RBP23.76■■□□□ 1.39
RNF38-205ENST00000377877 DHX58Q96C10 678 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 ZIC5Q96T25 663 aa23.76■■□□□ 1.39
RNF38-205ENST00000377877 FOXN1O15353 648 aa23.75■■□□□ 1.39
RNF38-205ENST00000377877 LETM1O95202 739 aaPredicted RBP23.75■■□□□ 1.39
RNF38-205ENST00000377877 AK8Q96MA6 479 aa23.75■■□□□ 1.39
RNF38-205ENST00000377877 PLIN2Q99541 437 aa23.75■■□□□ 1.39
RNF38-205ENST00000377877 NUDT12Q9BQG2 462 aa23.75■■□□□ 1.39
RNF38-205ENST00000377877 WDR11Q9BZH6 1224 aa23.75■■□□□ 1.39
RNF38-205ENST00000377877 LRWD1Q9UFC0 647 aa23.75■■□□□ 1.39
RNF38-205ENST00000377877 ASTN1O14525 1302 aa23.75■■□□□ 1.39
RNF38-205ENST00000377877 MANSC4A6NHS7 340 aaPredicted RBP23.74■■□□□ 1.39
RNF38-205ENST00000377877 TBX3O15119 743 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 ACTN4O43707 911 aaKnown RBP23.74■■□□□ 1.39
RNF38-205ENST00000377877 UBA7P41226 1012 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 ZNF784Q8NCA9 323 aaPredicted RBP23.74■■□□□ 1.39
RNF38-205ENST00000377877 CNNM3Q8NE01 707 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 GPRC5AQ8NFJ5 357 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 CCSER1Q9C0I3 900 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 EFCC1Q9HA90 598 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 UBIAD1Q9Y5Z9 338 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 NR3C2P08235 984 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 FSTL1Q12841 308 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 E2F4Q16254 413 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 TMEM266Q2M3C6 531 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 VSIG10LQ86VR7 867 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 SLFN12Q8IYM2 578 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 NSUN6Q8TEA1 469 aaKnown RBP23.74■■□□□ 1.39
RNF38-205ENST00000377877 MAF1Q9H063 256 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 TSPY26PQ9H489 355 aa23.74■■□□□ 1.39
RNF38-205ENST00000377877 YY1P25490 414 aa23.73■■□□□ 1.39
RNF38-205ENST00000377877 ZRSR1Q15695 479 aaKnown RBP23.73■■□□□ 1.39
RNF38-205ENST00000377877 CABP7Q86V35 215 aa23.73■■□□□ 1.39
RNF38-205ENST00000377877 GRAMD1CQ8IYS0 662 aa23.73■■□□□ 1.39
RNF38-205ENST00000377877 LRRC15Q8TF66 581 aa23.73■■□□□ 1.39
RNF38-205ENST00000377877 FAM20AQ96MK3 541 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms