RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 FBXO18Q8NFZ0 1043 aa11.83□□□□□ -0.51
HIF3A-205ENST00000377670 CAPN7Q9Y6W3 813 aa11.83□□□□□ -0.51
HIF3A-205ENST00000377670 POLR2BP30876 1174 aaKnown RBP11.83□□□□□ -0.52
HIF3A-205ENST00000377670 SNAPC2Q13487 334 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 BLIDQ8IZY5 108 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 MRRFQ96E11 262 aaKnown RBP11.83□□□□□ -0.52
HIF3A-205ENST00000377670 PPP1R16BQ96T49 567 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 SNX25Q9H3E2 840 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 FAM114A2Q9NRY5 505 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 MTUS1Q9ULD2 1270 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 FNDC3AQ9Y2H6 1198 aaKnown RBP11.83□□□□□ -0.52
HIF3A-205ENST00000377670 DIP2AQ14689 1571 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 A6NNZ2 444 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 SNAP25P60880 206 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 MTX1Q13505 466 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 TRIM14Q14142 442 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 UAP1Q16222 522 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-205ENST00000377670 TUBB8Q3ZCM7 444 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 CABP7Q86V35 215 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 SECISBP2LQ93073 1101 aaKnown RBP11.83□□□□□ -0.52
HIF3A-205ENST00000377670 PSMB7Q99436 277 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 TRIM31Q9BZY9 425 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 MTFR1LQ9H019 292 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 BSDC1Q9NW68 430 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-205ENST00000377670 BAIAP2L1Q9UHR4 511 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 GIPC1O14908 333 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 NMT2O60551 498 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 SCG2P13521 617 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 KRT10P13645 584 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 LMNB1P20700 586 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 TSNAXIP1Q2TAA8 658 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 ARHGEF2Q92974 986 aaKnown RBP11.83□□□□□ -0.52
HIF3A-205ENST00000377670 ZC3H13Q5T200 1668 aaKnown RBP11.83□□□□□ -0.52
HIF3A-205ENST00000377670 ARHGAP6O43182 974 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 SPOPO43791 374 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 ZNF131P52739 623 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 CSGALNACT2Q8N6G5 542 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 MARCH10Q8NA82 808 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-205ENST00000377670 ZNF577Q9BSK1 485 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 CSRNP2Q9H175 543 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 UTP11Q9Y3A2 253 aaKnown RBP11.83□□□□□ -0.52
HIF3A-205ENST00000377670 NCAPD2Q15021 1401 aa11.83□□□□□ -0.52
HIF3A-205ENST00000377670 SYNRGQ9UMZ2 1314 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 COPB2P35606 906 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 NLRP12P59046 1061 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 CFAP157Q5JU67 520 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 EXOC4Q96A65 974 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 INPP5FQ9Y2H2 1132 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 RABGAP1Q9Y3P9 1069 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 MED14O60244 1454 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 PREX1Q8TCU6 1659 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 GKAP1Q5VSY0 366 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-205ENST00000377670 FYB2Q5VWT5 728 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 TBC1D10CQ8IV04 446 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 RDH13Q8NBN7 331 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 SLC44A5Q8NCS7 719 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 PFDN4Q9NQP4 134 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 SLC12A6Q9UHW9 1150 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 LAMC1P11047 1609 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 ADGRB1O14514 1584 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 PTGDRQ13258 359 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 GRAMD1CQ8IYS0 662 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 RPUSD2Q8IZ73 545 aaKnown RBP11.82□□□□□ -0.52
HIF3A-205ENST00000377670 GPR161Q8N6U8 529 aaKnown RBP11.82□□□□□ -0.52
HIF3A-205ENST00000377670 MYCBPQ99417 103 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-205ENST00000377670 ISCA1Q9BUE6 129 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 USP17L10C9JJH3 530 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 VWA3BQ502W6 1294 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 ADALQ6DHV7 355 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 HINFPQ9BQA5 517 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 DDX25Q9UHL0 483 aaKnown RBP11.82□□□□□ -0.52
HIF3A-205ENST00000377670 PCDHA12Q9UN75 941 aa11.82□□□□□ -0.52
HIF3A-205ENST00000377670 SRGAP2BP0DMP2 458 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 PPFIA1Q13136 1202 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 KLHL7Q8IXQ5 586 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 SH3RF3Q8TEJ3 882 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-205ENST00000377670 STRBPQ96SI9 672 aaKnown RBP11.81□□□□□ -0.52
HIF3A-205ENST00000377670 TACO1Q9BSH4 297 aaKnown RBP11.81□□□□□ -0.52
HIF3A-205ENST00000377670 FRMPD1Q5SYB0 1578 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 GCKP35557 465 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 BBS5Q8N3I7 341 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 MARK3P27448 753 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 LRCH2Q5VUJ6 765 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 RNF207Q6ZRF8 634 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 VSIG1Q86XK7 387 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 CEP120Q8N960 986 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 PLEKHA4Q9H4M7 779 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 BCRP11274 1271 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 GNGT1P63211 74 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 DSTYKQ6XUX3 929 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 PPANQ9NQ55 473 aaKnown RBP11.81□□□□□ -0.52
HIF3A-205ENST00000377670 DPEP1P16444 411 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 LRMPQ12912 555 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 SMC1BQ8NDV3 1235 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 MIS12Q9H081 205 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 DIP2BQ9P265 1576 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 LARSQ9P2J5 1176 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms