RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 ADD2P35612 726 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 SLC1A4P43007 532 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 VCPP55072 806 aaKnown RBP11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 PDE4BQ07343 736 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 PDE4DQ08499 809 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 HYAL1Q12794 435 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 PTK7Q13308 1070 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 ADAM15Q13444 863 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 SBK1Q52WX2 424 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 MUM1L1Q5H9M0 696 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 MCTP2Q6DN12 878 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 C7orf31Q8N865 590 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 DHX38Q92620 1227 aaKnown RBP11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 NKD2Q969F2 451 aaPredicted RBP11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 ASIC4Q96FT7 647 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 CEP95Q96GE4 821 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 GMCL1Q96IK5 515 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 DNAJC2Q99543 621 aaKnown RBP11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 GTF2IRD1Q9UHL9 959 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 NLRC5Q86WI3 1866 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 C5orf67F2Z3F1 127 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 KDM4AO75164 1064 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 TRIM27P14373 513 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 NDUFV1P49821 464 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 BAATQ14032 418 aaPredicted RBP11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 UBE3CQ15386 1083 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 TCTN1Q2MV58 587 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 PPP4R3BQ5MIZ7 849 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 ZNF618Q5T7W0 954 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 GIMAP6Q6P9H5 292 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 FIBCD1Q8N539 461 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 DBF4BQ8NFT6 615 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 KATNAL1Q9BW62 490 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 IGFLR1Q9H665 355 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 CCPG1Q9ULG6 757 aa11.13□□□□□ -0.63
HLA-DOA-202ENST00000374813 RALGAPA2Q2PPJ7 1873 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 PTPDC1A2A3K4 754 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 RGS20O76081 388 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 UPP2O95045 317 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 ICAM1P05362 532 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 ICAM3P32942 547 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 BMPR1AP36894 532 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 COASYQ13057 564 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 MKRN4PQ13434 485 aaPredicted RBP11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 DGKDQ16760 1214 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 HSP90AB4PQ58FF6 505 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 RCSD1Q6JBY9 416 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 ZSCAN25Q6NSZ9 544 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 DNERQ8NFT8 737 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 PURBQ96QR8 312 aaKnown RBP11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 PHF7Q9BWX1 381 aaPredicted RBP11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 PAG1Q9NWQ8 432 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 HDAC6Q9UBN7 1215 aa11.12□□□□□ -0.63
HLA-DOA-202ENST00000374813 KMT2BQ9UMN6 2715 aaPredicted RBP11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 ACACBO00763 2458 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 MINDY4BA8MYZ0 360 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 RSPH10B2B2RC85 870 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 TBX10O75333 385 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 RSPH10BP0C881 870 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 MCCP23508 829 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 CTNNB1P35222 781 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 PLEKHG4Q58EX7 1191 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 TRAF7Q6Q0C0 670 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 ADSSL1Q8N142 457 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 STK11IPQ8N1F8 1099 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 CLASRPQ8N2M8 674 aaKnown RBP11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 SMRP1Q8NCR6 262 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 AFG1LQ8WV93 481 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 SEPT8Q92599 483 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 KAT2BQ92831 832 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 COPS5Q92905 334 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 MSLNLQ96KJ4 702 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 RIPOR3Q96MK2 946 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 IFIH1Q9BYX4 1025 aaKnown RBP11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 PNMA2Q9UL42 364 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 PRR12Q9ULL5 1215 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 NCOR2Q9Y618 2525 aa11.11□□□□□ -0.63
HLA-DOA-202ENST00000374813 CFAP47Q6ZTR5 3102 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 LCTP09848 1927 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 GRM6O15303 877 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 GH1P01241 217 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 MMP3P08254 477 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 IFIT2P09913 472 aaKnown RBP11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 TSPY3P0CV98 308 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 TSPY8P0CW00 308 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 RRP1P56182 461 aaKnown RBP11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 MBTPS1Q14703 1052 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 TRIM71Q2Q1W2 868 aaKnown RBP11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 FRAT1Q92837 279 aaPredicted RBP11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 PLVAPQ9BX97 442 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 COL4A6Q14031 1691 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 CHD8Q9HCK8 2581 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 ZFHX4Q86UP3 3567 aa11.1□□□□□ -0.63
HLA-DOA-202ENST00000374813 KRT37O76014 449 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 ATF7P17544 494 aaPredicted RBP11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 EDNRBP24530 442 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 CALML3P27482 149 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 THPOP40225 353 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms