RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 FBXO16Q8IX29 292 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-202ENST00000374676 TNS4Q8IZW8 715 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 RASGRP4Q8TDF6 673 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 ABHD8Q96I13 439 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.33
HSPG2-202ENST00000374676 RNF208Q9H0X6 261 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 ZHX1Q9UKY1 873 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-202ENST00000374676 FAM184BQ9ULE4 1060 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 CENPFP49454 3210 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 BTBD18B2RXH4 712 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 RGS20O76081 388 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 GJB1P08034 283 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 AKR1A1P14550 325 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 PDCP20941 246 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 USP11P51784 963 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 ARHGAP4P98171 946 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 CCDC144BQ3MJ40 725 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
HSPG2-202ENST00000374676 KCNV1Q6PIU1 500 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 EEPD1Q7L9B9 569 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
HSPG2-202ENST00000374676 OXER1Q8TDS5 423 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 SCFD2Q8WU76 684 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 TNFRSF25Q93038 417 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 PGBD1Q96JS3 809 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 INPP4AQ96PE3 977 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-202ENST00000374676 PDGFCQ9NRA1 345 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 UBIAD1Q9Y5Z9 338 aa12.97□□□□□ -0.33
HSPG2-202ENST00000374676 CCDC194A0A1B0GVG4 234 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 MAFGO15525 162 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 TGFB3P10600 412 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 CNGA1P29973 690 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 ICAM3P32942 547 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 CIITAP33076 1130 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 FOSBP53539 338 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 GUCY1B3Q02153 619 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 NONOQ15233 471 aaKnown RBP eCLIP12.96□□□□□ -0.33
HSPG2-202ENST00000374676 GNPTABQ3T906 1256 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 DUSP28Q4G0W2 176 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 LHX8Q68G74 356 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 NLRX1Q86UT6 975 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 WDR11Q9BZH6 1224 aa12.96□□□□□ -0.33
HSPG2-202ENST00000374676 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-202ENST00000374676 DDX20Q9UHI6 824 aaKnown RBP12.96□□□□□ -0.33
HSPG2-202ENST00000374676 SPATA31C2B4DYI2 1134 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 MEIS1O00470 390 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 NKRFO15226 690 aaKnown RBP eCLIP12.95□□□□□ -0.34
HSPG2-202ENST00000374676 EDIL3O43854 480 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 DUSP11O75319 330 aaKnown RBP12.95□□□□□ -0.34
HSPG2-202ENST00000374676 SGPL1O95470 568 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 ADCYAP1R1P41586 468 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 TNFAIP2Q03169 654 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 NR5A1Q13285 461 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 TTLL4Q14679 1199 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 CEP55Q53EZ4 464 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 CCDC62Q6P9F0 684 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 SEPT14Q6ZU15 432 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 NIPA1Q7RTP0 329 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 TBCKQ8TEA7 893 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 GPRASP2Q96D09 838 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 CDHR1Q96JP9 859 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 MXRA8Q9BRK3 442 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 JADE2Q9NQC1 790 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 RTEL1Q9NZ71 1219 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 DDX41Q9UJV9 622 aaKnown RBP12.95□□□□□ -0.34
HSPG2-202ENST00000374676 GNEQ9Y223 722 aaKnown RBP12.95□□□□□ -0.34
HSPG2-202ENST00000374676 Q9Y3F1 56 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 FRMPD3Q5JV73 1810 aa12.95□□□□□ -0.34
HSPG2-202ENST00000374676 CYP3A7-CYP3A51PA0A087WV96 503 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-202ENST00000374676 H3BQV1 296 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 MYCP01106 439 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-202ENST00000374676 HSP90AA1P07900 732 aaKnown RBP12.94□□□□□ -0.34
HSPG2-202ENST00000374676 TXNP10599 105 aaKnown RBP12.94□□□□□ -0.34
HSPG2-202ENST00000374676 RARBP10826 455 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 PDIA4P13667 645 aaKnown RBP12.94□□□□□ -0.34
HSPG2-202ENST00000374676 SMPD1P17405 629 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 ITGB5P18084 799 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 CYP3A7P24462 503 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 U2AF2P26368 475 aaKnown RBP eCLIP12.94□□□□□ -0.34
HSPG2-202ENST00000374676 ZNF76P36508 570 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 GJA8P48165 433 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 INF2Q27J81 1249 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 EARS2Q5JPH6 523 aaKnown RBP12.94□□□□□ -0.34
HSPG2-202ENST00000374676 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 MOXD1Q6UVY6 613 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 PIK3AP1Q6ZUJ8 805 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 ZFP91Q96JP5 570 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-202ENST00000374676 DEFB118Q96PH6 123 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 SENP7Q9BQF6 1050 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 CRISPLD2Q9H0B8 497 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 OGDHLQ9ULD0 1010 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 MRVI1Q9Y6F6 885 aa12.94□□□□□ -0.34
HSPG2-202ENST00000374676 FAM86B1E9PN63 330 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 ADCY6O43306 1168 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 FIBPO43427 364 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 ARIH2O95376 493 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 FAM86B2P0C5J1 330 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms