RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.23□□□□□ -0.13
PRPF4-201ENST00000374198 APPBP2Q92624 585 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 FERMT2Q96AC1 680 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 CHMP6Q96FZ7 201 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 EXOC1Q9NV70 894 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 TNS1Q9HBL0 1735 aaKnown RBP14.23□□□□□ -0.13
PRPF4-201ENST00000374198 B4E1Z4 1266 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 GPAA1O43292 621 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 GTPBP6O43824 516 aaPredicted RBP14.22□□□□□ -0.13
PRPF4-201ENST00000374198 LUC7L3O95232 432 aaKnown RBP14.22□□□□□ -0.13
PRPF4-201ENST00000374198 PLEKP08567 350 aaPredicted RBP14.22□□□□□ -0.13
PRPF4-201ENST00000374198 FERP16591 822 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 CCND1P24385 295 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 KLK7P49862 253 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 RBM5P52756 815 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF4-201ENST00000374198 TMEM67Q5HYA8 995 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 PTF1AQ7RTS3 328 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 TRIM22Q8IYM9 498 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF4-201ENST00000374198 KRT12Q99456 494 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 GDAQ9Y2T3 454 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 SLC12A7Q9Y666 1083 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 MYL6BP14649 208 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 CTNNA1P35221 906 aaKnown RBP14.22□□□□□ -0.13
PRPF4-201ENST00000374198 UAP1Q16222 522 aaPredicted RBP14.22□□□□□ -0.13
PRPF4-201ENST00000374198 LMBR1LQ6UX01 489 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 NUP133Q8WUM0 1156 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 MTRQ99707 1265 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 THAP9Q9H5L6 903 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 PAPOLBQ9NRJ5 636 aaKnown RBP14.22□□□□□ -0.13
PRPF4-201ENST00000374198 RMND1Q9NWS8 449 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 ZFATQ9P243 1243 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 NOVA2Q9UNW9 492 aaKnown RBP14.22□□□□□ -0.13
PRPF4-201ENST00000374198 SPEF2Q9C093 1822 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 TTC36A6NLP5 189 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 KCNQ2O43526 872 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 ATP4AP20648 1035 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 ABL2P42684 1182 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 KLHDC7AQ5VTJ3 777 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 COPS6Q7L5N1 327 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 MAGEC2Q9UBF1 373 aaPredicted RBP14.22□□□□□ -0.13
PRPF4-201ENST00000374198 TSKSQ9UJT2 592 aa14.22□□□□□ -0.13
PRPF4-201ENST00000374198 BCL9O00512 1426 aa14.21□□□□□ -0.13
PRPF4-201ENST00000374198 RPN1P04843 607 aaKnown RBP14.21□□□□□ -0.13
PRPF4-201ENST00000374198 ROR2Q01974 943 aaKnown RBP14.21□□□□□ -0.13
PRPF4-201ENST00000374198 PDXDC2PQ6P474 469 aa14.21□□□□□ -0.13
PRPF4-201ENST00000374198 EIF1ADQ8N9N8 165 aaKnown RBP14.21□□□□□ -0.13
PRPF4-201ENST00000374198 TSC22D3Q99576 134 aa14.21□□□□□ -0.13
PRPF4-201ENST00000374198 PCDH11XQ9BZA7 1347 aa14.21□□□□□ -0.13
PRPF4-201ENST00000374198 PCDH11YQ9BZA8 1340 aa14.21□□□□□ -0.13
PRPF4-201ENST00000374198 KIF11P52732 1056 aa14.21□□□□□ -0.14
PRPF4-201ENST00000374198 PMS1P54277 932 aaKnown RBP14.21□□□□□ -0.14
PRPF4-201ENST00000374198 ITIH4Q14624 930 aa14.21□□□□□ -0.14
PRPF4-201ENST00000374198 RPUSD2Q8IZ73 545 aaKnown RBP14.21□□□□□ -0.14
PRPF4-201ENST00000374198 ADSSL1Q8N142 457 aa14.21□□□□□ -0.14
PRPF4-201ENST00000374198 LRRC45Q96CN5 670 aa14.21□□□□□ -0.14
PRPF4-201ENST00000374198 PCMTD1Q96MG8 357 aaPredicted RBP14.21□□□□□ -0.14
PRPF4-201ENST00000374198 TMX4Q9H1E5 349 aaPredicted RBP14.21□□□□□ -0.14
PRPF4-201ENST00000374198 SALL4Q9UJQ4 1053 aa14.21□□□□□ -0.14
PRPF4-201ENST00000374198 A0A1W2PQJ5 194 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 FAM205CA6NFA0 338 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 DEXIO95424 95 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 LCA5LO95447 670 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 IL15P40933 162 aaPredicted RBP14.2□□□□□ -0.14
PRPF4-201ENST00000374198 MAGOHP61326 146 aaKnown RBP14.2□□□□□ -0.14
PRPF4-201ENST00000374198 HLTFQ14527 1009 aaKnown RBP eCLIP14.2□□□□□ -0.14
PRPF4-201ENST00000374198 ERMARDQ5T6L9 678 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 TYW1BQ6NUM6 668 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 MAGOHBQ96A72 148 aaKnown RBP14.2□□□□□ -0.14
PRPF4-201ENST00000374198 XPO6Q96QU8 1125 aaKnown RBP14.2□□□□□ -0.14
PRPF4-201ENST00000374198 CAMKK2Q96RR4 588 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 TUBGCP2Q9BSJ2 902 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 ISCUQ9H1K1 167 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 ARHGAP20Q9P2F6 1191 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 SBF2Q86WG5 1849 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 A0A087WZG4 1122 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 GRID2IPA4D2P6 1211 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 DCDC2CA8MYV0 355 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 STXBP3O00186 592 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 RAD51CO43502 376 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 NQO1P15559 274 aaKnown RBP14.2□□□□□ -0.14
PRPF4-201ENST00000374198 LIFRP42702 1097 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 CTCFP49711 727 aaPredicted RBP14.2□□□□□ -0.14
PRPF4-201ENST00000374198 CENPTQ96BT3 561 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 UBAC1Q9BSL1 405 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 FAM167BQ9BTA0 163 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 OSBPL1AQ9BXW6 950 aa14.2□□□□□ -0.14
PRPF4-201ENST00000374198 ASAP2O43150 1006 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 MYBP10242 640 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 GNAT1P11488 350 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 ECHS1P30084 290 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 HNRNPH3P31942 346 aaKnown RBP14.19□□□□□ -0.14
PRPF4-201ENST00000374198 GCLCP48506 637 aaPredicted RBP14.19□□□□□ -0.14
PRPF4-201ENST00000374198 GNPTABQ3T906 1256 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 FAM133BQ5BKY9 247 aaKnown RBP14.19□□□□□ -0.14
PRPF4-201ENST00000374198 FIGNQ5HY92 759 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 ANKRD20A2Q5SQ80 823 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 ANKRD20A1Q5TYW2 823 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 ANKRD20A3Q5VUR7 823 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms