RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 MAATS1Q7Z4T9 603 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 CCDC51Q96ER9 411 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 PANX2Q96RD6 677 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 NUP58Q9BVL2 599 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 NT5C3AQ9H0P0 336 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 JMJD4Q9H9V9 463 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 INTS13Q9NVM9 706 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 KDM3BQ7LBC6 1761 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 LAD1O00515 517 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 EXOC3O60645 756 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 SMC1AQ14683 1233 aaKnown RBP13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 SFMBT2Q5VUG0 894 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 CNKSR1Q969H4 720 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 RGL1Q9NZL6 768 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 PALM3A6NDB9 673 aaPredicted RBP13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 EPB41P11171 864 aaKnown RBP13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 GJC1P36383 396 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 CKAP4Q07065 602 aaKnown RBP13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 ASIC2Q16515 512 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 NIM1KQ8IY84 436 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 ARMCX3Q9UH62 379 aaPredicted RBP13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 LGALS16A8MUM7 142 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 KRT13P13646 458 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 ZNF543Q08ER8 600 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 IL17AQ16552 155 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 FAM133AQ8N9E0 248 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 CCDC113Q9H0I3 377 aa13.05□□□□□ -0.32
PACSIN1-202ENST00000374043 CAPN2P17655 700 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 SF3A3Q12874 501 aaKnown RBP eCLIP13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 TMC4Q7Z404 712 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 ADSSL1Q8N142 457 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 GPR161Q8N6U8 529 aaKnown RBP13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 CTNNBL1Q8WYA6 563 aaPredicted RBP13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 SPZ1Q9BXG8 430 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 PCIF1Q9H4Z3 704 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 EMILIN3Q9NT22 766 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 SRGAP1Q7Z6B7 1085 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 REXO1L1PQ8IX06 675 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 FTCDO95954 541 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 PPP4CP60510 307 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 ARHGAP4P98171 946 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 MDM2Q00987 491 aaPredicted RBP13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 FUT2Q10981 343 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 KIAA0753Q2KHM9 967 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 TAX1BP1Q86VP1 789 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 GSPT2Q8IYD1 628 aaKnown RBP13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 MLXIPQ9HAP2 919 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
PACSIN1-202ENST00000374043 DDTLA6NHG4 134 aaPredicted RBP13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 GCOM1H8Y6P7 765 aaPredicted RBP13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 FLOT1O75955 427 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 POLR2MP0CAP2 368 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 XRCC5P13010 732 aaKnown RBP13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 FKBP3Q00688 224 aaKnown RBP13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 EHHADHQ08426 723 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 NUDT12Q9BQG2 462 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 ZMYND12Q9H0C1 365 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 HAUS4Q9H6D7 363 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 CCPG1Q9ULG6 757 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 GOLGA6L10A6NI86 522 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 RPL13P26373 211 aaKnown RBP13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 TM4SF1P30408 202 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 SLC7A5Q01650 507 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 PODNQ7Z5L7 613 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 TBC1D5Q92609 795 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 CCDC127Q96BQ5 260 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 GTPBP4Q9BZE4 634 aaKnown RBP13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 RABGAP1Q9Y3P9 1069 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 CEP104O60308 925 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 C2orf54Q08AI8 447 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 CETN1Q12798 172 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 NAA35Q5VZE5 725 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 STXBP4Q6ZWJ1 553 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 FRMD4BQ9Y2L6 1034 aa13.03□□□□□ -0.32
PACSIN1-202ENST00000374043 SMIM23A6NLE4 172 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 ZBTB7AO95365 584 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 ODR4Q5SWX8 454 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 TMED8Q6PL24 325 aaPredicted RBP13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 U2AF1L4Q8WU68 220 aaKnown RBP13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 TCHPQ9BT92 498 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 C5P01031 1676 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 LRRN2O75325 713 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 NDUFB10O96000 172 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 STAT2P52630 851 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 LONRF2Q1L5Z9 754 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 HDXQ7Z353 690 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 FAM178BQ8IXR5 827 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 SMAP1Q8IYB5 467 aaPredicted RBP13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 NOX5Q96PH1 765 aa13.02□□□□□ -0.32
PACSIN1-202ENST00000374043 CRAMP1Q96RY5 1269 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms