RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 CPSF3Q9UKF6 684 aaKnown RBP12.09□□□□□ -0.47
PHACTR4-202ENST00000373839 PCDHB4Q9Y5E5 795 aa12.09□□□□□ -0.47
PHACTR4-202ENST00000373839 METP08581 1390 aa12.09□□□□□ -0.47
PHACTR4-202ENST00000373839 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 NR2F2P24468 414 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 CTNNA1P35221 906 aaKnown RBP12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 COPB2P35606 906 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 PCDHA7Q9UN72 937 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 DGKHQ86XP1 1220 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 CCHCR1Q8TD31 782 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 HEXIM1O94992 359 aaKnown RBP12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 IFNAR1P17181 557 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 ANXA13P27216 316 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 ARL4AP40617 200 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 H7C0C1 242 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 LIFRP42702 1097 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 ATP5OP48047 213 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 RBBP5Q15291 538 aaKnown RBP12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 RAB44Q7Z6P3 723 aaPredicted RBP12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 DCAF4Q8WV16 495 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 ZNF148Q9UQR1 794 aa12.08□□□□□ -0.48
PHACTR4-202ENST00000373839 GSTA1P08263 222 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 GSTA2P09210 222 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 PPP4R3CPQ6ZMV5 832 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 SEPT14Q6ZU15 432 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 FAM71BQ8TC56 605 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 BAG5Q9UL15 447 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 ERCC3P19447 782 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 JAK3P52333 1124 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 MAN2A1Q16706 1144 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 TRIM42Q8IWZ5 723 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 CNOT6LQ96LI5 555 aaKnown RBP12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 KLHL14Q9P2G3 628 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 LCMT1Q9UIC8 334 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 FDX1P10109 184 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 INPP5BP32019 993 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 IFRD2Q12894 506 aaPredicted RBP12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 HVCN1Q96D96 273 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 PUS3Q9BZE2 481 aaKnown RBP12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 ABT1Q9ULW3 272 aaKnown RBP12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 IGSF3O75054 1194 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 LDHAP00338 332 aaKnown RBP12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 USP17L8P0C7I0 530 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 ADORA1P30542 326 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 ELF1P32519 619 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 SPATS2Q86XZ4 545 aaKnown RBP12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 SPICE1Q8N0Z3 855 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 CMTR1Q8N1G2 835 aaKnown RBP12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 APOL6Q9BWW8 343 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 BRIP1Q9BX63 1249 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 LSG1Q9H089 658 aaKnown RBP12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 LRRC4Q9HBW1 653 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 UNC13AQ9UPW8 1703 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 A0A1B0GUA9 196 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 C10orf76Q5T2E6 689 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 P2RX5Q93086 422 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 FAM149B1Q96BN6 582 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 ADGBQ8N7X0 1667 aa12.07□□□□□ -0.48
PHACTR4-202ENST00000373839 GOLGA8KD6RF30 607 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 GSPT1P15170 499 aaKnown RBP12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 LONRF3Q496Y0 759 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 NLRP7Q8WX94 980 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 PSMB7Q99436 277 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 SH3GLB2Q9NR46 395 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 PNMA6FA0A0J9YX94 578 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 WDR64B1ANS9 1081 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 PODNQ7Z5L7 613 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 TUBGCP2Q9BSJ2 902 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 SEPT10Q9P0V9 454 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 GADD45BO75293 160 aaPredicted RBP12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 PCK1P35558 622 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 NDUFAF2Q8N183 169 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 SPZ1Q9BXG8 430 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 HOXC10Q9NYD6 342 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 GDF11O95390 407 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 U2AF2P26368 475 aaKnown RBP eCLIP12.06□□□□□ -0.484e-8■■■□□ 17.9
PHACTR4-202ENST00000373839 CCDC13Q8IYE1 715 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 TBCKQ8TEA7 893 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 PARVGQ9HBI0 331 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 SLC38A10Q9HBR0 1119 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 RNF14Q9UBS8 474 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 JRKLQ9Y4A0 524 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 RAD17O75943 681 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 PPARGP37231 505 aaPredicted RBP12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 PSMD6Q15008 389 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 ARL6IP4Q66PJ3 421 aaKnown RBP12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 PHLDB3Q6NSJ2 640 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 SCYL1Q96KG9 808 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 MTA3Q9BTC8 594 aa12.06□□□□□ -0.48
PHACTR4-202ENST00000373839 CIITAP33076 1130 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 MID2Q9UJV3 735 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 EPN1Q9Y6I3 576 aaPredicted RBP12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 MYO5CQ9NQX4 1742 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 IKBKBO14920 756 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 MMP10P09238 476 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 GTF2A1P52655 376 aaPredicted RBP12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 ADKP55263 362 aaKnown RBP12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 KCTD1Q719H9 257 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms