RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 HMGCS2P54868 508 aa17.62■□□□□ 0.41
HDAC8-209ENST00000373589 SPATA1Q5VX52 437 aa17.62■□□□□ 0.41
HDAC8-209ENST00000373589 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.62■□□□□ 0.41
HDAC8-209ENST00000373589 SV2BQ7L1I2 683 aa17.62■□□□□ 0.41
HDAC8-209ENST00000373589 SULF1Q8IWU6 871 aa17.62■□□□□ 0.41
HDAC8-209ENST00000373589 LARP4BQ92615 738 aaKnown RBP17.62■□□□□ 0.41
HDAC8-209ENST00000373589 RAD54LQ92698 747 aa17.62■□□□□ 0.41
HDAC8-209ENST00000373589 EHMT1Q9H9B1 1298 aa17.62■□□□□ 0.41
HDAC8-209ENST00000373589 RAVER2Q9HCJ3 691 aaKnown RBP17.62■□□□□ 0.41
HDAC8-209ENST00000373589 KDM3AQ9Y4C1 1321 aa17.62■□□□□ 0.41
HDAC8-209ENST00000373589 ADM5C9JUS6 153 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 VWA5AO00534 786 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 NFIBO00712 420 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 ZBED4O75132 1171 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 CLCN1P35523 988 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 ZNF76P36508 570 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 CCDC144BQ3MJ40 725 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 KLHL10Q6JEL2 608 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 DPY19L2Q6NUT2 758 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 CNNM4Q6P4Q7 775 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 DLK2Q6UY11 383 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 CCDC186Q7Z3E2 898 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 KCNK18Q7Z418 384 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 MCF2L2Q86YR7 1114 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 CPXCR1Q8N123 301 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 NT5C3AQ9H0P0 336 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 KCNF1Q9H3M0 494 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 GDAQ9Y2T3 454 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 SNCAIPQ9Y6H5 919 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 SYNRGQ9UMZ2 1314 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 PARP14Q460N5 1801 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 PTGS1P23219 599 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 CCT6AP40227 531 aaKnown RBP17.61■□□□□ 0.41
HDAC8-209ENST00000373589 MAP3K9P80192 1104 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 MCM6Q14566 821 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 SAMD3Q8N6K7 520 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 GIMAP8Q8ND71 665 aaPredicted RBP17.61■□□□□ 0.41
HDAC8-209ENST00000373589 ATG4CQ96DT6 458 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 UIMC1Q96RL1 719 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 MAP3K20Q9NYL2 800 aaKnown RBP17.61■□□□□ 0.41
HDAC8-209ENST00000373589 RWDD2AQ9UIY3 292 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 VAV3Q9UKW4 847 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 ADAMTS5Q9UNA0 930 aa17.61■□□□□ 0.41
HDAC8-209ENST00000373589 RPTORQ8N122 1335 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 MYMKA6NI61 221 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 ZNF500O60304 480 aaPredicted RBP17.6■□□□□ 0.41
HDAC8-209ENST00000373589 ALAS1P13196 640 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 STAT3P40763 770 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 PRKG1Q13976 671 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 VGLL4Q14135 290 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 SH3D19Q5HYK7 790 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 USP50Q70EL3 339 aaPredicted RBP17.6■□□□□ 0.41
HDAC8-209ENST00000373589 ADSSL1Q8N142 457 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 REPS2Q8NFH8 660 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 SAMSN1Q9NSI8 373 aaKnown RBP17.6■□□□□ 0.41
HDAC8-209ENST00000373589 COL20A1Q9P218 1284 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 RABGAP1Q9Y3P9 1069 aa17.6■□□□□ 0.41
HDAC8-209ENST00000373589 PAPPA2Q9BXP8 1791 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 RLFQ13129 1914 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 CBFA2T2O43439 604 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 SERPINC1P01008 464 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 DSG3P32926 999 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 PRCPP42785 496 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 STX17P56962 302 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 UBASH3AP57075 661 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 ASIC1P78348 528 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 CEP55Q53EZ4 464 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 MUM1L1Q5H9M0 696 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 CDKAL1Q5VV42 579 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 CATSPERGQ6ZRH7 1159 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 KRT26Q7Z3Y9 468 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 ZC3H15Q8WU90 426 aaKnown RBP17.59■□□□□ 0.41
HDAC8-209ENST00000373589 WNK4Q96J92 1243 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 GTPBP4Q9BZE4 634 aaKnown RBP17.59■□□□□ 0.41
HDAC8-209ENST00000373589 CTNND2Q9UQB3 1225 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 STK24Q9Y6E0 443 aa17.59■□□□□ 0.41
HDAC8-209ENST00000373589 MEIS1O00470 390 aa17.58■□□□□ 0.41
HDAC8-209ENST00000373589 PPP1R12BO60237 982 aaPredicted RBP17.58■□□□□ 0.41
HDAC8-209ENST00000373589 PAK1Q13153 545 aa17.58■□□□□ 0.41
HDAC8-209ENST00000373589 HAUS3Q68CZ6 603 aa17.58■□□□□ 0.41
HDAC8-209ENST00000373589 RBM46Q8TBY0 533 aaKnown RBP17.58■□□□□ 0.41
HDAC8-209ENST00000373589 NAP1L5Q96NT1 182 aaPredicted RBP17.58■□□□□ 0.41
HDAC8-209ENST00000373589 LRRC27Q9C0I9 530 aa17.58■□□□□ 0.41
HDAC8-209ENST00000373589 TMOD4Q9NZQ9 345 aa17.58■□□□□ 0.41
HDAC8-209ENST00000373589 IMPACTQ9P2X3 320 aa17.58■□□□□ 0.41
HDAC8-209ENST00000373589 CTDP1Q9Y5B0 961 aaPredicted RBP17.58■□□□□ 0.41
HDAC8-209ENST00000373589 ZC3H4Q9UPT8 1303 aaKnown RBP17.58■□□□□ 0.41
HDAC8-209ENST00000373589 PVALEFA0A1B0GWK0 134 aa17.58■□□□□ 0.4
HDAC8-209ENST00000373589 MED24O75448 989 aa17.58■□□□□ 0.4
HDAC8-209ENST00000373589 OAZ1P54368 228 aa17.58■□□□□ 0.4
HDAC8-209ENST00000373589 UBXN2AP68543 259 aa17.58■□□□□ 0.4
HDAC8-209ENST00000373589 DHX8Q14562 1220 aaKnown RBP17.58■□□□□ 0.4
HDAC8-209ENST00000373589 COG2Q14746 738 aa17.58■□□□□ 0.4
HDAC8-209ENST00000373589 SYTL5Q8TDW5 730 aaPredicted RBP17.58■□□□□ 0.4
HDAC8-209ENST00000373589 NELFBQ8WX92 580 aa17.58■□□□□ 0.4
HDAC8-209ENST00000373589 SLC5A5Q92911 643 aa17.58■□□□□ 0.4
HDAC8-209ENST00000373589 CCDC47Q96A33 483 aaKnown RBP17.58■□□□□ 0.4
HDAC8-209ENST00000373589 RTN4Q9NQC3 1192 aaKnown RBP17.58■□□□□ 0.4
HDAC8-209ENST00000373589 EXOC1Q9NV70 894 aa17.58■□□□□ 0.4
HDAC8-209ENST00000373589 KIAA1024Q9UPX6 916 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms