RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 SMC1AQ14683 1233 aaKnown RBP18.59■□□□□ 0.57
HDAC8-206ENST00000373571 ECM1Q16610 540 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 MAN2A1Q16706 1144 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 DCAF8Q5TAQ9 597 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 GJA10Q969M2 543 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 MTMR8Q96EF0 704 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 NDST4Q9H3R1 872 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 PSTPIP2Q9H939 334 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 ATP1A1P05023 1023 aaKnown RBP18.59■□□□□ 0.57
HDAC8-206ENST00000373571 SLURP2P0DP57 97 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 NPR1P16066 1061 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 EHHADHQ08426 723 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 PSMD2Q13200 908 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 HDAC6Q9UBN7 1215 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 ABCB11O95342 1321 aa18.59■□□□□ 0.57
HDAC8-206ENST00000373571 ARFGEF1Q9Y6D6 1849 aa18.58■□□□□ 0.57
HDAC8-206ENST00000373571 RCCD1A6NED2 376 aa18.58■□□□□ 0.57
HDAC8-206ENST00000373571 POLR3GO15318 223 aaPredicted RBP18.58■□□□□ 0.57
HDAC8-206ENST00000373571 ERLIN1O75477 346 aa18.58■□□□□ 0.57
HDAC8-206ENST00000373571 GCFC2P16383 781 aaKnown RBP18.58■□□□□ 0.57
HDAC8-206ENST00000373571 OAS2P29728 719 aaKnown RBP18.58■□□□□ 0.57
HDAC8-206ENST00000373571 HOXA7P31268 230 aaPredicted RBP18.58■□□□□ 0.57
HDAC8-206ENST00000373571 NOA1Q8NC60 698 aaKnown RBP18.58■□□□□ 0.57
HDAC8-206ENST00000373571 LACRTQ9GZZ8 138 aa18.58■□□□□ 0.57
HDAC8-206ENST00000373571 SIK3Q9Y2K2 1263 aa18.58■□□□□ 0.57
HDAC8-206ENST00000373571 LRRC41Q15345 812 aa18.58■□□□□ 0.56
HDAC8-206ENST00000373571 BEND6Q5SZJ8 279 aaPredicted RBP18.58■□□□□ 0.56
HDAC8-206ENST00000373571 TSG101Q99816 390 aa18.58■□□□□ 0.56
HDAC8-206ENST00000373571 EHD4Q9H223 541 aa18.58■□□□□ 0.56
HDAC8-206ENST00000373571 PCDHA12Q9UN75 941 aa18.58■□□□□ 0.56
HDAC8-206ENST00000373571 SAR1BQ9Y6B6 198 aa18.58■□□□□ 0.56
HDAC8-206ENST00000373571 RAD21O60216 631 aa18.57■□□□□ 0.56
HDAC8-206ENST00000373571 CYP27A1Q02318 531 aa18.57■□□□□ 0.56
HDAC8-206ENST00000373571 LRRC55Q6ZSA7 311 aa18.57■□□□□ 0.56
HDAC8-206ENST00000373571 ZFPM1Q8IX07 1006 aa18.57■□□□□ 0.56
HDAC8-206ENST00000373571 GLIS3Q8NEA6 775 aa18.57■□□□□ 0.56
HDAC8-206ENST00000373571 CCDC17Q96LX7 622 aa18.57■□□□□ 0.56
HDAC8-206ENST00000373571 CCDC42Q96M95 316 aa18.57■□□□□ 0.56
HDAC8-206ENST00000373571 FAM207AQ9NSI2 230 aaPredicted RBP18.57■□□□□ 0.56
HDAC8-206ENST00000373571 ATF5Q9Y2D1 282 aaPredicted RBP18.57■□□□□ 0.56
HDAC8-206ENST00000373571 NRXN2Q9P2S2 1712 aa18.57■□□□□ 0.56
HDAC8-206ENST00000373571 MAP2K7O14733 419 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 EPHB6O15197 1021 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 ALDH1B1P30837 517 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 CRKP46108 304 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 COASYQ13057 564 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 PAPD7Q5XG87 772 aaKnown RBP18.56■□□□□ 0.56
HDAC8-206ENST00000373571 DNAJC19Q96DA6 116 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 DNAJC18Q9H819 358 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 PLAGL2Q9UPG8 496 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 KDM3AQ9Y4C1 1321 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 PLEKP08567 350 aaPredicted RBP18.56■□□□□ 0.56
HDAC8-206ENST00000373571 HNRNPH3P31942 346 aaKnown RBP18.56■□□□□ 0.56
HDAC8-206ENST00000373571 VAV2P52735 878 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 VSNL1P62760 191 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 SEPT2Q15019 361 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 CCDC84Q86UT8 332 aaPredicted RBP18.56■□□□□ 0.56
HDAC8-206ENST00000373571 MYOCDQ8IZQ8 938 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 NAP1L4Q99733 375 aaKnown RBP18.56■□□□□ 0.56
HDAC8-206ENST00000373571 NT5C3AQ9H0P0 336 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 TMX4Q9H1E5 349 aaPredicted RBP18.56■□□□□ 0.56
HDAC8-206ENST00000373571 MMRN2Q9H8L6 949 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 ABCB6Q9NP58 842 aa18.56■□□□□ 0.56
HDAC8-206ENST00000373571 USP17L15C9J2P7 530 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 USP17L13C9JLJ4 530 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 USP17L11C9JVI0 530 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 USP17L18D6R9N7 530 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 USP17L22D6RA61 530 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 USP17L17D6RBQ6 530 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 USP17L19D6RCP7 530 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 USP17L20D6RJB6 530 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 USP17L24Q0WX57 530 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 KIF5AQ12840 1032 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 SPA17Q15506 151 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 QRICH1Q2TAL8 776 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 HYIQ5T013 277 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 USP17L6PQ6QN14 398 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 C2CD5Q86YS7 1000 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 PROM2Q8N271 834 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 PURBQ96QR8 312 aaKnown RBP18.55■□□□□ 0.56
HDAC8-206ENST00000373571 TSGA10Q9BZW7 698 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 PANK4Q9NVE7 773 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 DUSP10Q9Y6W6 482 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 SIPA1L1O43166 1804 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 COL11A2P13942 1736 aaPredicted RBP18.55■□□□□ 0.56
HDAC8-206ENST00000373571 MACROD2A1Z1Q3 448 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 FAM196BA6NMK8 535 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 ZNF263O14978 683 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 SRGAP2O75044 1071 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 SSBP05455 408 aaKnown RBP eCLIP18.55■□□□□ 0.56
HDAC8-206ENST00000373571 SLC1A4P43007 532 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 CACNB3P54284 484 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 TCP10Q12799 353 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 FOXR2Q6PJQ5 311 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 HDXQ7Z353 690 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 GLT8D2Q9H1C3 349 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 DBNDD1Q9H9R9 158 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 ARHGAP20Q9P2F6 1191 aa18.55■□□□□ 0.56
HDAC8-206ENST00000373571 TUBBP07437 444 aa18.54■□□□□ 0.56
HDAC8-206ENST00000373571 EEF2P13639 858 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms