RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 GRM6O15303 877 aa14.74□□□□□ -0.05
HDAC8-204ENST00000373560 IGSF3O75054 1194 aa14.74□□□□□ -0.05
HDAC8-204ENST00000373560 CKBP12277 381 aa14.74□□□□□ -0.05
HDAC8-204ENST00000373560 PLCB2Q00722 1185 aa14.74□□□□□ -0.05
HDAC8-204ENST00000373560 CBX2Q14781 532 aaPredicted RBP14.74□□□□□ -0.05
HDAC8-204ENST00000373560 DGLUCYQ7Z3D6 616 aa14.74□□□□□ -0.05
HDAC8-204ENST00000373560 CAGE1Q8TC20 777 aa14.74□□□□□ -0.05
HDAC8-204ENST00000373560 CCDC17Q96LX7 622 aa14.74□□□□□ -0.05
HDAC8-204ENST00000373560 WDR11Q9BZH6 1224 aa14.74□□□□□ -0.05
HDAC8-204ENST00000373560 VTA1Q9NP79 307 aa14.74□□□□□ -0.05
HDAC8-204ENST00000373560 INCENPQ9NQS7 918 aa14.74□□□□□ -0.05
HDAC8-204ENST00000373560 ZNF532Q9HCE3 1301 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 TPRP12270 2363 aaKnown RBP14.73□□□□□ -0.05
HDAC8-204ENST00000373560 TCRBV5S4A2TA0A5A2 114 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 CHGBP05060 677 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 LINC00271P0C7V0 271 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 CPT1AP50416 773 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 SNAP25P60880 206 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 RBL2Q08999 1139 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 C12orf60Q5U649 245 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 MORC4Q8TE76 937 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 NKD2Q969F2 451 aaPredicted RBP14.73□□□□□ -0.05
HDAC8-204ENST00000373560 OSBPL7Q9BZF2 842 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 CYP39A1Q9NYL5 469 aa14.73□□□□□ -0.05
HDAC8-204ENST00000373560 CTDP1Q9Y5B0 961 aaPredicted RBP14.73□□□□□ -0.05
HDAC8-204ENST00000373560 C2orf72A6NCS6 295 aa14.72□□□□□ -0.05
HDAC8-204ENST00000373560 USP17L12C9JPN9 530 aa14.72□□□□□ -0.05
HDAC8-204ENST00000373560 USP17L21D6R901 530 aa14.72□□□□□ -0.05
HDAC8-204ENST00000373560 RRP1P56182 461 aaKnown RBP14.72□□□□□ -0.05
HDAC8-204ENST00000373560 PTPN11Q06124 597 aaPredicted RBP14.72□□□□□ -0.05
HDAC8-204ENST00000373560 IKBKEQ14164 716 aa14.72□□□□□ -0.05
HDAC8-204ENST00000373560 TRIM71Q2Q1W2 868 aaKnown RBP14.72□□□□□ -0.05
HDAC8-204ENST00000373560 CHMP4CQ96CF2 233 aa14.72□□□□□ -0.05
HDAC8-204ENST00000373560 EAF2Q96CJ1 260 aaPredicted RBP14.72□□□□□ -0.05
HDAC8-204ENST00000373560 GPHNQ9NQX3 736 aaPredicted RBP14.72□□□□□ -0.05
HDAC8-204ENST00000373560 CLEC1BQ9P126 229 aa14.72□□□□□ -0.05
HDAC8-204ENST00000373560 TNNQ9UQP3 1299 aa14.72□□□□□ -0.05
HDAC8-204ENST00000373560 MAP1BP46821 2468 aaKnown RBP14.71□□□□□ -0.05
HDAC8-204ENST00000373560 EYA4O95677 639 aa14.71□□□□□ -0.05
HDAC8-204ENST00000373560 ZNF618Q5T7W0 954 aa14.71□□□□□ -0.05
HDAC8-204ENST00000373560 STK11IPQ8N1F8 1099 aa14.71□□□□□ -0.05
HDAC8-204ENST00000373560 LRRC47Q8N1G4 583 aaKnown RBP14.71□□□□□ -0.05
HDAC8-204ENST00000373560 CCDC155Q8N6L0 562 aa14.71□□□□□ -0.05
HDAC8-204ENST00000373560 SMRP1Q8NCR6 262 aa14.71□□□□□ -0.05
HDAC8-204ENST00000373560 RPGRIP1Q96KN7 1286 aa14.71□□□□□ -0.05
HDAC8-204ENST00000373560 SAMD11Q96NU1 681 aa14.71□□□□□ -0.05
HDAC8-204ENST00000373560 HDAC5Q9UQL6 1122 aa14.71□□□□□ -0.05
HDAC8-204ENST00000373560 USP15Q9Y4E8 981 aaPredicted RBP14.71□□□□□ -0.05
HDAC8-204ENST00000373560 CHD6Q8TD26 2715 aa14.71□□□□□ -0.06
HDAC8-204ENST00000373560 ACACBO00763 2458 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 RBM47A0AV96 593 aaKnown RBP14.7□□□□□ -0.06
HDAC8-204ENST00000373560 GLP2RO95838 553 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 ALAS1P13196 640 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 CTNNB1P35222 781 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 NDUFV1P49821 464 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 OAZ1P54368 228 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 ADAM15Q13444 863 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 PTPN21Q16825 1174 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 SLC9C2Q5TAH2 1124 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 RASGRP2Q7LDG7 609 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 ADGRD2Q7Z7M1 963 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 DBF4BQ8NFT6 615 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 KAT2BQ92831 832 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 RIPOR3Q96MK2 946 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 TRERF1Q96PN7 1200 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 YME1L1Q96TA2 773 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 SMOC2Q9H3U7 446 aa14.7□□□□□ -0.06
HDAC8-204ENST00000373560 A6NJR5 290 aa14.69□□□□□ -0.06
HDAC8-204ENST00000373560 UPP2O95045 317 aa14.69□□□□□ -0.06
HDAC8-204ENST00000373560 MBD4O95243 580 aa14.69□□□□□ -0.06
HDAC8-204ENST00000373560 ARIH2O95376 493 aa14.69□□□□□ -0.06
HDAC8-204ENST00000373560 AMHP03971 560 aa14.69□□□□□ -0.06
HDAC8-204ENST00000373560 GNAI3P08754 354 aa14.69□□□□□ -0.06
HDAC8-204ENST00000373560 ALDH5A1P51649 535 aaPredicted RBP14.69□□□□□ -0.06
HDAC8-204ENST00000373560 ZNF200P98182 395 aaPredicted RBP14.69□□□□□ -0.06
HDAC8-204ENST00000373560 CAMK1Q14012 370 aa14.69□□□□□ -0.06
HDAC8-204ENST00000373560 HIC1Q14526 733 aa14.69□□□□□ -0.06
HDAC8-204ENST00000373560 ALDH1L2Q3SY69 923 aa14.69□□□□□ -0.06
HDAC8-204ENST00000373560 BARX2Q9UMQ3 279 aaPredicted RBP14.69□□□□□ -0.06
HDAC8-204ENST00000373560 FRYLO94915 3013 aa14.69□□□□□ -0.06
HDAC8-204ENST00000373560 USP24Q9UPU5 2620 aa14.68□□□□□ -0.06
HDAC8-204ENST00000373560 NCK2O43639 380 aa14.68□□□□□ -0.06
HDAC8-204ENST00000373560 EFCAB14O75071 495 aa14.68□□□□□ -0.06
HDAC8-204ENST00000373560 RASA1P20936 1047 aa14.68□□□□□ -0.06
HDAC8-204ENST00000373560 ICAM3P32942 547 aa14.68□□□□□ -0.06
HDAC8-204ENST00000373560 RBM10P98175 930 aaKnown RBP14.68□□□□□ -0.06
HDAC8-204ENST00000373560 NSMFQ6X4W1 530 aa14.68□□□□□ -0.06
HDAC8-204ENST00000373560 MRS2Q9HD23 443 aa14.68□□□□□ -0.06
HDAC8-204ENST00000373560 NYAP2Q9P242 653 aa14.68□□□□□ -0.06
HDAC8-204ENST00000373560 CLIP2Q9UDT6 1046 aa14.68□□□□□ -0.06
HDAC8-204ENST00000373560 FEM1BQ9UK73 627 aa14.68□□□□□ -0.06
HDAC8-204ENST00000373560 ZBED9Q6R2W3 1325 aa14.67□□□□□ -0.06
HDAC8-204ENST00000373560 EP300Q09472 2414 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-204ENST00000373560 MYH7P12883 1935 aa14.67□□□□□ -0.06
HDAC8-204ENST00000373560 IGKV6D-41A0A0C4DH26 115 aa14.67□□□□□ -0.06
HDAC8-204ENST00000373560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-204ENST00000373560 SP100P23497 879 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-204ENST00000373560 DNAJB1P25685 340 aa14.67□□□□□ -0.06
HDAC8-204ENST00000373560 OS9Q13438 667 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-204ENST00000373560 COL9A2Q14055 689 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms