RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 BIRC2Q13490 618 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 SHROOM1Q2M3G4 852 aaPredicted RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 SBK1Q52WX2 424 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 KANK3Q6NY19 840 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 IQUBQ8NA54 791 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 MNS1Q8NEH6 495 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 RASSF8Q8NHQ8 419 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 FEZ1Q99689 392 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 RTFDC1Q9BY42 306 aaPredicted RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 OSBPL2Q9H1P3 480 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 TUT1Q9H6E5 874 aaKnown RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 ZCCHC17Q9NP64 241 aaKnown RBP7.17□□□□□ -1.26
CHD6-202ENST00000373222 DACH1Q9UI36 760 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 PCDHA4Q9UN74 947 aa7.17□□□□□ -1.26
CHD6-202ENST00000373222 FRMPD2Q68DX3 1309 aaPredicted RBP7.16□□□□□ -1.26
CHD6-202ENST00000373222 STXBP3O00186 592 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 PNMA6AP0CW24 399 aaPredicted RBP7.16□□□□□ -1.26
CHD6-202ENST00000373222 FCER1AP12319 257 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 RFC4P35249 363 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 SEMA3FQ13275 785 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 PPP2R5BQ15173 497 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 ECM1Q16610 540 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 LETM2Q2VYF4 491 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 PRR5LQ6MZQ0 368 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 CCDC34Q96HJ3 373 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 SLF1Q9BQI6 1058 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 NYXQ9GZU5 481 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 CCSER2Q9H7U1 834 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 DISC1Q9NRI5 854 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 MRFAP1Q9Y605 127 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 MYH7BA7E2Y1 1941 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 USP17L5A8MUK1 530 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 KCNJ18B7U540 433 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 KLRF2D3W0D1 207 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 ZSCAN12O43309 604 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 KLRC4O43908 158 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 UFL1O94874 794 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 KIF4AO95239 1232 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 S100BP04271 92 aaPredicted RBP7.16□□□□□ -1.26
CHD6-202ENST00000373222 PLA2G4AP47712 749 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 CDK8P49336 464 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 COPB1P53618 953 aaKnown RBP7.16□□□□□ -1.26
CHD6-202ENST00000373222 GYS2P54840 703 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 PPP2R3AQ06190 1150 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 PAK1Q13153 545 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 PICALMQ13492 652 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 KCNJ12Q14500 433 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 GRM4Q14833 912 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 TXNRD1Q16881 649 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 TCP11X2Q5H9J9 407 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 JAKMIP3Q5VZ66 844 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 PPFIBP1Q86W92 1011 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 CNBD1Q8NA66 436 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 EPS8L1Q8TE68 723 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 CEP95Q96GE4 821 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 PIGSQ96S52 555 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 ANKRD2Q9GZV1 360 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 SUGCTQ9HAC7 445 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 POLLQ9UGP5 575 aa7.16□□□□□ -1.26
CHD6-202ENST00000373222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.15□□□□□ -1.26
CHD6-202ENST00000373222 CCNT1O60563 726 aaKnown RBP7.15□□□□□ -1.26
CHD6-202ENST00000373222 PLCG1P19174 1290 aa7.15□□□□□ -1.26
CHD6-202ENST00000373222 ZNF569Q5MCW4 686 aa7.15□□□□□ -1.26
CHD6-202ENST00000373222 ZNF444Q8N0Y2 327 aaPredicted RBP7.15□□□□□ -1.26
CHD6-202ENST00000373222 KRT222Q8N1A0 295 aa7.15□□□□□ -1.26
CHD6-202ENST00000373222 LRRC47Q8N1G4 583 aaKnown RBP7.15□□□□□ -1.26
CHD6-202ENST00000373222 SLC35F6Q8N357 371 aa7.15□□□□□ -1.26
CHD6-202ENST00000373222 GLIS3Q8NEA6 775 aa7.15□□□□□ -1.26
CHD6-202ENST00000373222 COA7Q96BR5 231 aa7.15□□□□□ -1.26
CHD6-202ENST00000373222 NUP88Q99567 741 aaPredicted RBP7.15□□□□□ -1.26
CHD6-202ENST00000373222 ABHD10Q9NUJ1 306 aa7.15□□□□□ -1.26
CHD6-202ENST00000373222 FAM53CQ9NYF3 392 aa7.15□□□□□ -1.26
CHD6-202ENST00000373222 REXO2Q9Y3B8 237 aaKnown RBP7.15□□□□□ -1.26
CHD6-202ENST00000373222 FLT1P17948 1338 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 TTC26A0AVF1 554 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 ENC1O14682 589 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 EDIL3O43854 480 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 ZRANB2O95218 330 aaKnown RBP eCLIP7.15□□□□□ -1.271e-6■■■■□ 23.3
CHD6-202ENST00000373222 CCDC175P0C221 793 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 NDUFV2P19404 249 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 KIF5BP33176 963 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 SOX11P35716 441 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 TECP42680 631 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 NAPAP54920 295 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 UBXN1Q04323 297 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 STK4Q13043 487 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 GRAPQ13588 217 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 MFSD14BQ5SR56 506 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 ZNF658Q5TYW1 1059 aaPredicted RBP7.15□□□□□ -1.27
CHD6-202ENST00000373222 DTHD1Q6ZMT9 781 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 PLPP6Q8IY26 295 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 GRAPLQ8TC17 118 aaPredicted RBP7.15□□□□□ -1.27
CHD6-202ENST00000373222 PANX2Q96RD6 677 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 KCNK17Q96T54 332 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 EYA3Q99504 573 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 HINFPQ9BQA5 517 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 SRRTQ9BXP5 876 aaKnown RBP7.15□□□□□ -1.27
CHD6-202ENST00000373222 CD209Q9NNX6 404 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 AGPAT5Q9NUQ2 364 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 BARHL2Q9NY43 387 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms