RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MFSD4BQ5TF39 518 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 SFMBT2Q5VUG0 894 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 TMED8Q6PL24 325 aaPredicted RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 APOBEC3FQ8IUX4 373 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 FAM178BQ8IXR5 827 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 SP8Q8IXZ3 490 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 CDHR1Q96JP9 859 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 MED10Q9BTT4 135 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 PRKAG2Q9UGJ0 569 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 SOS2Q07890 1332 aaPredicted RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 RIMS1Q86UR5 1692 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 ASNSP08243 561 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 HHATQ5VTY9 493 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 ATP2A3Q93084 1043 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 MED4Q9NPJ6 270 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 PARP2Q9UGN5 583 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 NRKQ7Z2Y5 1582 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 LAD1O00515 517 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 PFKFB1P16118 471 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 ETF1P62495 437 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 DCUN1D2Q6PH85 259 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 TRIML1Q8N9V2 468 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 RETREG2Q8NC44 543 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 FAM71BQ8TC56 605 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 JPH2Q9BR39 696 aaPredicted RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 IFIH1Q9BYX4 1025 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 PCYT1AP49585 367 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 COG7P83436 770 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 BARGINQ6ZT62 677 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 TRIM58Q8NG06 486 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 RAB17Q9H0T7 212 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 CD2APQ9Y5K6 639 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 CAPN7Q9Y6W3 813 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 CYP2D7A0A087X1C5 515 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 DENND2CQ68D51 928 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 WDR75Q8IWA0 830 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 TRMT44Q8IYL2 757 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 RNF10Q8N5U6 811 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 LARSQ9P2J5 1176 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 PHLDB2Q86SQ0 1253 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 VPS52Q8N1B4 723 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 DEUP1Q05D60 604 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 KLHL30Q0D2K2 578 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 RC3H1Q5TC82 1133 aaKnown RBP14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 ASIC3Q9UHC3 531 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 AKT3Q9Y243 479 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 INO80Q9ULG1 1556 aaPredicted RBP14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 LRMPQ12912 555 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 KRT71Q3SY84 523 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 KIF2CQ99661 725 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 VCX3AQ9NNX9 186 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 STK10O94804 968 aaKnown RBP14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 CACNB3P54284 484 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 CYP4A11Q02928 519 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 PTGDRQ13258 359 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 R3HDM1Q15032 1099 aaKnown RBP14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 TRIM60Q495X7 471 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 ISCA1Q9BUE6 129 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 ANO3Q9BYT9 981 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 TDRD3Q9H7E2 651 aaKnown RBP14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 BAIAP2L1Q9UHR4 511 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 ZC3H13Q5T200 1668 aaKnown RBP14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 CPDO75976 1380 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 ATP8B1O43520 1251 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 SMIM24O75264 130 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 XRCC5P13010 732 aaKnown RBP14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 USP17L2Q6R6M4 530 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 DLC1Q96QB1 1528 aa14.53□□□□□ -0.08
RAPGEF1-201ENST00000372189 PIK3C2BO00750 1634 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 TMED1Q13445 227 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 PEX26Q7Z412 305 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 EXOC8Q8IYI6 725 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 PSMB7Q99436 277 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 FAM204AQ9H8W3 233 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 DDX41Q9UJV9 622 aaKnown RBP14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 SH2B2O14492 632 aaPredicted RBP14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 RGS12O14924 1447 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 RASSF2P50749 326 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 CDC37Q16543 378 aaPredicted RBP14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 ARHGAP44Q17R89 818 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 EPHA10Q5JZY3 1008 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 EP400NLQ6ZTU2 488 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 GAS2L3Q86XJ1 694 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 RIOK1Q9BRS2 568 aaKnown RBP14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 CAPS2Q9BXY5 557 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 FOXP1Q9H334 677 aaPredicted RBP14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 CTTNBP2NLQ9P2B4 639 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 MTMR6Q9Y217 621 aa14.52□□□□□ -0.08
RAPGEF1-201ENST00000372189 NT5C2P49902 561 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 SLC17A8Q8NDX2 589 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 EIF2AQ9BY44 585 aaKnown RBP14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 WDR11Q9BZH6 1224 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 SETD1BQ9UPS6 1966 aaKnown RBP14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 GH2P01242 217 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 GCFC2P16383 781 aaKnown RBP14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 TRAPPC10P48553 1259 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 ADCK5Q3MIX3 580 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 SESTD1Q86VW0 696 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 FLCNQ8NFG4 579 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 OR8K1Q8NGG5 319 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms