RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
LCN1-202ENST00000371781 EPSTI1Q96J88 318 aa12.34□□□□□ -0.43
LCN1-202ENST00000371781 PORCNQ9H237 461 aa12.34□□□□□ -0.43
LCN1-202ENST00000371781 DDX25Q9UHL0 483 aaKnown RBP12.34□□□□□ -0.43
LCN1-202ENST00000371781 RABGAP1Q9Y3P9 1069 aa12.34□□□□□ -0.43
LCN1-202ENST00000371781 ZNF236Q9UL36 1845 aa12.34□□□□□ -0.43
LCN1-202ENST00000371781 ERCC3P19447 782 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 OSBPP22059 807 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 CDC25AP30304 524 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 PRPHP41219 470 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 USP11P51784 963 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 ERVK-9P63128 1117 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 ERVK-24P63145 666 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 FAM160A1Q05DH4 1040 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 SPIRE1Q08AE8 756 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 PABPC4Q13310 644 aaKnown RBP eCLIP12.33□□□□□ -0.44
LCN1-202ENST00000371781 ZSCAN23Q3MJ62 389 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 Q4G0T1 1027 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
LCN1-202ENST00000371781 MCTP2Q6DN12 878 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 RBM43Q6ZSC3 357 aaKnown RBP12.33□□□□□ -0.44
LCN1-202ENST00000371781 MCF2L2Q86YR7 1114 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 SYMPKQ92797 1274 aaKnown RBP12.33□□□□□ -0.44
LCN1-202ENST00000371781 FERMT2Q96AC1 680 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 PDCD2LQ9BRP1 358 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 MMTAG2Q9BU76 263 aaKnown RBP12.33□□□□□ -0.44
LCN1-202ENST00000371781 CLSTN2Q9H4D0 955 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 PXMP2Q9NR77 195 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 MORF4L1Q9UBU8 362 aa12.33□□□□□ -0.44
LCN1-202ENST00000371781 CTDP1Q9Y5B0 961 aaPredicted RBP12.33□□□□□ -0.44
LCN1-202ENST00000371781 PLXNA1Q9UIW2 1896 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 SOWAHBA6NEL2 793 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 MSH4O15457 936 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 ACTN4O43707 911 aaKnown RBP12.32□□□□□ -0.44
LCN1-202ENST00000371781 GCFC2P16383 781 aaKnown RBP12.32□□□□□ -0.44
LCN1-202ENST00000371781 ITGB5P18084 799 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 EIF2AK2P19525 551 aaKnown RBP12.32□□□□□ -0.44
LCN1-202ENST00000371781 CNTN2Q02246 1040 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 SEMA3FQ13275 785 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 PGM5Q15124 567 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 E2F4Q16254 413 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 CALCRLQ16602 461 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 CCDC183Q5T5S1 534 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 IGSF22Q8N9C0 903 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 CHST13Q8NET6 341 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 NUDT12Q9BQG2 462 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 FUCA2Q9BTY2 467 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 EFCC1Q9HA90 598 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 VAV3Q9UKW4 847 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 PNMA2Q9UL42 364 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 UBIAD1Q9Y5Z9 338 aa12.32□□□□□ -0.44
LCN1-202ENST00000371781 DOCK5Q9H7D0 1870 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 KIAA1217Q5T5P2 1943 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 ZNFX1Q9P2E3 1918 aaKnown RBP12.31□□□□□ -0.44
LCN1-202ENST00000371781 MCM3APO60318 1980 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 DNAJC25-GNG10A0A024R161 153 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 POTEMA6NI47 508 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 LAD1O00515 517 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 ARP10275 920 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 BCRP11274 1271 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 FXR2P51116 673 aaKnown RBP eCLIP12.31□□□□□ -0.44
LCN1-202ENST00000371781 PRR16Q569H4 304 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 NAALADL2Q58DX5 795 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 CCDC73Q6ZRK6 1079 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 GAS2L3Q86XJ1 694 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 SAMD3Q8N6K7 520 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 DDX19AQ9NUU7 478 aaKnown RBP12.31□□□□□ -0.44
LCN1-202ENST00000371781 MAP3K20Q9NYL2 800 aaKnown RBP12.31□□□□□ -0.44
LCN1-202ENST00000371781 PNMA3Q9UL41 463 aa12.31□□□□□ -0.44
LCN1-202ENST00000371781 A0A087WWV3 80 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 SYCE3A1L190 88 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 GOLGA6L4A6NEF3 574 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 MANSC4A6NHS7 340 aaPredicted RBP12.3□□□□□ -0.44
LCN1-202ENST00000371781 MEIS1O00470 390 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 RGS20O76081 388 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 ZNF202O95125 648 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 LONP1P36776 959 aaKnown RBP12.3□□□□□ -0.44
LCN1-202ENST00000371781 TXKP42681 527 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 SOX10P56693 466 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 ZNF445P59923 1031 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 PCNX4Q63HM2 1172 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 B3GNT9Q6UX72 402 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 DTHD1Q6ZMT9 781 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 NCAPG2Q86XI2 1143 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 ANKRD13CQ8N6S4 541 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 SHCBP1Q8NEM2 672 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 ERCC4Q92889 916 aaPredicted RBP12.3□□□□□ -0.44
LCN1-202ENST00000371781 PNMA5Q96PV4 448 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 RMDN3Q96TC7 470 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 MTRQ99707 1265 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 MXRA8Q9BRK3 442 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 NUP62CLQ9H1M0 184 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 KCNH3Q9ULD8 1083 aa12.3□□□□□ -0.44
LCN1-202ENST00000371781 TRPA1O75762 1119 aa12.29□□□□□ -0.44
LCN1-202ENST00000371781 PGK2P07205 417 aa12.29□□□□□ -0.44
LCN1-202ENST00000371781 EDNRBP24530 442 aa12.29□□□□□ -0.44
LCN1-202ENST00000371781 TECP42680 631 aa12.29□□□□□ -0.44
LCN1-202ENST00000371781 SYKP43405 635 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms