RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ASIC2Q16515 512 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 HEATR3Q7Z4Q2 680 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 LRRC34Q8IZ02 419 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 LRRC43Q8N309 656 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 FAM210AQ96ND0 272 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 ZMYND12Q9H0C1 365 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 STRN4Q9NRL3 753 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 PANK4Q9NVE7 773 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 ATP6V0A2Q9Y487 856 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 POGZQ7Z3K3 1410 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 CCDC189A1A4V9 331 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 DYTNA2CJ06 578 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 ECEL1O95672 775 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 ATP5DP30049 168 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 FOXP4Q8IVH2 680 aaPredicted RBP12.84□□□□□ -0.35
PTPN1-201ENST00000371621 DSCC1Q9BVC3 393 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 TXLNGQ9NUQ3 528 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 ATP10DQ9P241 1426 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 YEATS2Q9ULM3 1422 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 PDE2AO00408 941 aaPredicted RBP12.84□□□□□ -0.35
PTPN1-201ENST00000371621 CUL4BQ13620 913 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 LETM2Q2VYF4 491 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 ERICH1Q86X53 443 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 FAXDC2Q96IV6 333 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 CENPKQ9BS16 269 aa12.84□□□□□ -0.35
PTPN1-201ENST00000371621 THRAP3Q9Y2W1 955 aaKnown RBP12.84□□□□□ -0.35
PTPN1-201ENST00000371621 SPOPO43791 374 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 DKC1O60832 514 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTPN1-201ENST00000371621 GLI1P08151 1106 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 GNAT2P19087 354 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 SERPINB6P35237 376 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 CCDC92Q53HC0 331 aaPredicted RBP12.83□□□□□ -0.36
PTPN1-201ENST00000371621 DCTN4Q9UJW0 460 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 POC1B-GALNT4F8VUJ3 575 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 CTNNA2P26232 953 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 APOA5Q6Q788 366 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 U2AF1L4Q8WU68 220 aaKnown RBP12.83□□□□□ -0.36
PTPN1-201ENST00000371621 P3H4Q92791 437 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 SYNCQ9H7C4 482 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 DNAJC8O75937 253 aaPredicted RBP12.83□□□□□ -0.36
PTPN1-201ENST00000371621 PRPF6O94906 941 aaKnown RBP12.83□□□□□ -0.36
PTPN1-201ENST00000371621 NQO1P15559 274 aaKnown RBP12.83□□□□□ -0.36
PTPN1-201ENST00000371621 CYP4F22Q6NT55 531 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 RILPQ96NA2 401 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 LSM14BQ9BX40 385 aaKnown RBP12.83□□□□□ -0.36
PTPN1-201ENST00000371621 RNF41Q9H4P4 317 aaPredicted RBP12.83□□□□□ -0.36
PTPN1-201ENST00000371621 DBR1Q9UK59 544 aaKnown RBP12.83□□□□□ -0.36
PTPN1-201ENST00000371621 STX8Q9UNK0 236 aa12.83□□□□□ -0.36
PTPN1-201ENST00000371621 PGRMC1O00264 195 aaKnown RBP12.82□□□□□ -0.36
PTPN1-201ENST00000371621 DNM1LO00429 736 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 KCNJ2P63252 427 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 LCA5Q86VQ0 697 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 TRIM42Q8IWZ5 723 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 RPS6KC1Q96S38 1066 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 INTS13Q9NVM9 706 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 PSMD14O00487 310 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 FANCGO15287 622 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 PLEKP08567 350 aaPredicted RBP12.82□□□□□ -0.36
PTPN1-201ENST00000371621 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
PTPN1-201ENST00000371621 FAM81AQ8TBF8 368 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 LRRC37BQ96QE4 947 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 AMFRQ9UKV5 643 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 MTUS1Q9ULD2 1270 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.82□□□□□ -0.36
PTPN1-201ENST00000371621 CAPN6Q9Y6Q1 641 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 THAP12O43422 761 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 IL15P40933 162 aaPredicted RBP12.82□□□□□ -0.36
PTPN1-201ENST00000371621 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
PTPN1-201ENST00000371621 ISLR2Q6UXK2 745 aa12.82□□□□□ -0.36
PTPN1-201ENST00000371621 TSPY2A6NKD2 308 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 NVLO15381 856 aaKnown RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 ABCD1P33897 745 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 PRCPP42785 496 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 KLK7P49862 253 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 ALDH5A1P51649 535 aaPredicted RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 BTKQ06187 659 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 SLC44A4Q53GD3 710 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 SRRM1Q8IYB3 904 aaKnown RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 ST13P4Q8IZP2 240 aaPredicted RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 IL17REQ8NFR9 667 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 CNKSR2Q8WXI2 1034 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 KRT23Q9C075 422 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 KCND1Q9NSA2 647 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 RAD51CO43502 376 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 C21orf2O43822 256 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 ATP6V1G1O75348 118 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 POLD1P28340 1107 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 HSD17B3P37058 310 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 ZAP70P43403 619 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 ROR2Q01974 943 aaKnown RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 IKQ13123 557 aaPredicted RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 MIER3Q7Z3K6 550 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 ARHGAP24Q8N264 748 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 TAB3Q8N5C8 712 aaPredicted RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 FERMT2Q96AC1 680 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 KANSL2Q9H9L4 492 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms