RNA–Protein interactions for RNA: ENST00000371402.4

RHOXF2B-201, Transcript of Rhox homeobox family member 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF2B, Length 2,864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2B-201ENST00000371402 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 COL14A1Q05707 1796 aaKnown RBP12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 HMGB1P1B2RPK0 211 aaPredicted RBP12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 NKRFO15226 690 aaKnown RBP eCLIP12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 NAP1L1P55209 391 aaKnown RBP12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 MECOMQ03112 1051 aa12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 EVX2Q03828 476 aa12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 PDCLQ13371 301 aa12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 SF3B3Q15393 1217 aaKnown RBP12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 LRIG3Q6UXM1 1119 aa12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 LRRC55Q6ZSA7 311 aa12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 PROM2Q8N271 834 aa12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 STAG2Q8N3U4 1231 aa12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 PCDHGC5Q9Y5F6 944 aa12.67□□□□□ -0.38
RHOXF2B-201ENST00000371402 PALM3A6NDB9 673 aaPredicted RBP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 BTNL10A8MVZ5 291 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 BHMG1C9JSJ3 638 aaPredicted RBP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 HSPA9P38646 679 aaKnown RBP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 EHHADHQ08426 723 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 DRP2Q13474 957 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 LUC7LQ9NQ29 371 aaKnown RBP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 CYTH3O43739 400 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 PPP1R37O75864 691 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 KIAA0754O94854 1291 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 GLI1P08151 1106 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 PSMD2Q13200 908 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 NONOQ15233 471 aaKnown RBP eCLIP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 NAB2Q15742 525 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 PTGISQ16647 500 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 RRAGAQ7L523 313 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 CALML4Q96GE6 196 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 ATP6V1G3Q96LB4 118 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 CCDC43Q96MW1 224 aaKnown RBP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 INPP4AQ96PE3 977 aaPredicted RBP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 PLIN2Q99541 437 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 TACO1Q9BSH4 297 aaKnown RBP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 FAM207AQ9NSI2 230 aaPredicted RBP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 CEP72Q9P209 647 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 TMEM59LQ9UK28 342 aa12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 DDX60LQ5H9U9 1706 aaKnown RBP12.66□□□□□ -0.38
RHOXF2B-201ENST00000371402 ATP8B3O60423 1300 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 NCK2O43639 380 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 HEXIM1O94992 359 aaKnown RBP12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 SERPING1P05155 500 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 CYP2D6P10635 497 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 NR1D1P20393 614 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 MEI1Q5TIA1 1274 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 NAA35Q5VZE5 725 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 PPP4R3AQ6IN85 833 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 SV2BQ7L1I2 683 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 RNPC3Q96LT9 517 aaKnown RBP12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 TAF1P21675 1872 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 SMARCA1P28370 1054 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 CXCR5P32302 372 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 SLC1A4P43007 532 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 CARSP49589 748 aaKnown RBP12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 CDC37Q16543 378 aaPredicted RBP12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 C12orf60Q5U649 245 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 NEK8Q86SG6 692 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 OTUD6BQ8N6M0 293 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 CABS1Q96KC9 395 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 BLOC1S4Q9NUP1 217 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 SMARCAL1Q9NZC9 954 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 EHD2Q9NZN4 543 aa12.65□□□□□ -0.38
RHOXF2B-201ENST00000371402 MATR3P43243 847 aaKnown RBP eCLIP12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 TFAP4Q01664 338 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 HEATR3Q7Z4Q2 680 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 LRRC27Q9C0I9 530 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 MMRN2Q9H8L6 949 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 PLCB1Q9NQ66 1216 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 NFU1Q9UMS0 254 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 SAMM50Q9Y512 469 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 ESYT2A0FGR8 921 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 KRT14P02533 472 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 MDH1P40925 334 aaKnown RBP12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 RASSF7Q02833 373 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 GFPT1Q06210 699 aaPredicted RBP12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 GRB10Q13322 594 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 ITGB3BPQ13352 177 aaPredicted RBP12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 SLC9C1Q4G0N8 1177 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 FBXW10Q5XX13 1052 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 CASKIN2Q8WXE0 1202 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 EPB41L5Q9HCM4 733 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 SLC39A2Q9NP94 309 aa12.64□□□□□ -0.39
RHOXF2B-201ENST00000371402 FAM107AO95990 144 aa12.63□□□□□ -0.39
RHOXF2B-201ENST00000371402 FAM153BP0C7A2 387 aa12.63□□□□□ -0.39
RHOXF2B-201ENST00000371402 MARSP56192 900 aaKnown RBP12.63□□□□□ -0.39
RHOXF2B-201ENST00000371402 KCNMA1Q12791 1236 aa12.63□□□□□ -0.39
RHOXF2B-201ENST00000371402 FAM153CQ494X1 144 aa12.63□□□□□ -0.39
RHOXF2B-201ENST00000371402 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
RHOXF2B-201ENST00000371402 SH2D3CQ8N5H7 860 aa12.63□□□□□ -0.39
RHOXF2B-201ENST00000371402 EEF2KMTQ96G04 330 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms