RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 DCAF4Q8WV16 495 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 PASKQ96RG2 1323 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 ZNF577Q9BSK1 485 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 MMRN2Q9H8L6 949 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 FAM13BQ9NYF5 915 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 FBXO40Q9UH90 709 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 MYH13Q9UKX3 1938 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 AKT3Q9Y243 479 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 R3HCC1Q9Y3T6 440 aaKnown RBP7.93□□□□□ -1.14
USP1-202ENST00000371146 FARP2O94887 1054 aaPredicted RBP7.93□□□□□ -1.14
USP1-202ENST00000371146 SRGAP2CP0DJJ0 459 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 AFMP43652 599 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 MAP2K5Q13163 448 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 C7orf31Q8N865 590 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 SDF4Q9BRK5 362 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 TINF2Q9BSI4 451 aa7.93□□□□□ -1.14
USP1-202ENST00000371146 POTEFA5A3E0 1075 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 CCDC169A6NNP5 214 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 DEXIO95424 95 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 TDP2O95551 362 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 IGFBP4P22692 258 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 KRT2P35908 639 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 MTMR1Q13613 665 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 SWSAP1Q6NVH7 229 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 PIGOQ8TEQ8 1089 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 U2AF1L4Q8WU68 220 aaKnown RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 TRAPPC12Q8WVT3 735 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 ZBED3Q96IU2 234 aaPredicted RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 NLRP4Q96MN2 994 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 MYCBPQ99417 103 aaPredicted RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 BCAS3Q9H6U6 928 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 HPS5Q9UPZ3 1129 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 IRS2Q9Y4H2 1338 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 CYTH3O43739 400 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 ACRP10323 421 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 OSTNP61366 133 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 TROAPQ12815 778 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 TTLL4Q14679 1199 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 NONOQ15233 471 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP1-202ENST00000371146 ALX1Q15699 326 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 HSP90AA4PQ58FG1 418 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 OTOP2Q7RTS6 562 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 ANKRD23Q86SG2 305 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 RNF180Q86T96 592 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 MYOCDQ8IZQ8 938 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 BLIDQ8IZY5 108 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 RNF217Q8TC41 542 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 MICAL1Q8TDZ2 1067 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 ERCC4Q92889 916 aaPredicted RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 WDR18Q9BV38 432 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 SEPT9Q9UHD8 586 aaPredicted RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 TPRP12270 2363 aaKnown RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 RIF1Q5UIP0 2472 aaKnown RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 SALL3Q9BXA9 1300 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 TMEM150BA6NC51 233 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 GOLGA6L22H0YM25 854 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 RBM25P49756 843 aaKnown RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 ACVR2BQ13705 512 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 CTTNQ14247 550 aaKnown RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 LBX2Q6XYB7 198 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 TMTC3Q6ZXV5 915 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 MIER3Q7Z3K6 550 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 DIS3LQ8TF46 1054 aaKnown RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 TRIB2Q92519 343 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 BICD1Q96G01 975 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 ZSCAN31Q96LW9 406 aaPredicted RBP7.92□□□□□ -1.14
USP1-202ENST00000371146 ANO3Q9BYT9 981 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 TBC1D2Q9BYX2 928 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 TMEM39AQ9NV64 488 aa7.92□□□□□ -1.14
USP1-202ENST00000371146 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.91□□□□□ -1.14
USP1-202ENST00000371146 SFI1A8K8P3 1242 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 XRCC6P12956 609 aaKnown RBP eCLIP7.91□□□□□ -1.14
USP1-202ENST00000371146 ARHGAP4P98171 946 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 TOB2Q14106 344 aaPredicted RBP7.91□□□□□ -1.14
USP1-202ENST00000371146 CAMK4Q16566 473 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 LRCH2Q5VUJ6 765 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 DYMQ7RTS9 669 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 FAM177A1Q8N128 213 aaPredicted RBP7.91□□□□□ -1.14
USP1-202ENST00000371146 IL31RAQ8NI17 732 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 MAD2L2Q9UI95 211 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 FAM184BQ9ULE4 1060 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 INPP5FQ9Y2H2 1132 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 LOC102724159A0A0B4J2E5 919 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 BIN1O00499 593 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 TBC1D12O60347 775 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 SLC25A27O95847 323 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 CCDC172P0C7W6 258 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 COPB2P35606 906 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 CACNB2Q08289 660 aaPredicted RBP7.91□□□□□ -1.14
USP1-202ENST00000371146 PWP2Q15269 919 aaKnown RBP7.91□□□□□ -1.14
USP1-202ENST00000371146 TMEM266Q2M3C6 531 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 XKR9Q5GH70 373 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 KLHL10Q6JEL2 608 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 GPAT2Q6NUI2 795 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 MKL1Q969V6 931 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 ZSWIM6Q9HCJ5 1215 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.91□□□□□ -1.14
USP1-202ENST00000371146 BRWD1Q9NSI6 2320 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 PTPREP23469 700 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 SESTD1Q86VW0 696 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms