RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TMTC2Q8N394 836 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 CTCFLQ8NI51 663 aaPredicted RBP17.57■□□□□ 0.4
SS18L1-202ENST00000370848 TBC1D5Q92609 795 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 WDR11Q9BZH6 1224 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 PPP1R12CQ9BZL4 782 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 ALDH8A1Q9H2A2 487 aaPredicted RBP17.57■□□□□ 0.4
SS18L1-202ENST00000370848 RIOX1Q9H6W3 641 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 UMODL1Q5DID0 1318 aa17.56■□□□□ 0.4
SS18L1-202ENST00000370848 PTPDC1A2A3K4 754 aa17.56■□□□□ 0.4
SS18L1-202ENST00000370848 HMGB1P09429 215 aaKnown RBP17.56■□□□□ 0.4
SS18L1-202ENST00000370848 APOA5Q6Q788 366 aa17.56■□□□□ 0.4
SS18L1-202ENST00000370848 Q6ZUG5 572 aa17.56■□□□□ 0.4
SS18L1-202ENST00000370848 FBXO11Q86XK2 927 aa17.56■□□□□ 0.4
SS18L1-202ENST00000370848 SRBD1Q8N5C6 995 aaKnown RBP17.56■□□□□ 0.4
SS18L1-202ENST00000370848 SCFD2Q8WU76 684 aa17.56■□□□□ 0.4
SS18L1-202ENST00000370848 MAP3K14Q99558 947 aa17.56■□□□□ 0.4
SS18L1-202ENST00000370848 KIAA1217Q5T5P2 1943 aa17.55■□□□□ 0.4
SS18L1-202ENST00000370848 ABCB11O95342 1321 aa17.55■□□□□ 0.4
SS18L1-202ENST00000370848 KLF18A0A0U1RQI7 1052 aa17.55■□□□□ 0.4
SS18L1-202ENST00000370848 ZBTB5O15062 677 aa17.55■□□□□ 0.4
SS18L1-202ENST00000370848 KPNA6O60684 536 aa17.55■□□□□ 0.4
SS18L1-202ENST00000370848 PFKMP08237 780 aa17.55■□□□□ 0.4
SS18L1-202ENST00000370848 CALML3P27482 149 aa17.55■□□□□ 0.4
SS18L1-202ENST00000370848 PTPN11Q06124 597 aaPredicted RBP17.55■□□□□ 0.4
SS18L1-202ENST00000370848 APOBRQ0VD83 1088 aa17.55■□□□□ 0.4
SS18L1-202ENST00000370848 BRF1Q92994 677 aa17.55■□□□□ 0.4
SS18L1-202ENST00000370848 MPHOSPH6Q99547 160 aaKnown RBP17.55■□□□□ 0.4
SS18L1-202ENST00000370848 UPF3BQ9BZI7 483 aaKnown RBP17.55■□□□□ 0.4
SS18L1-202ENST00000370848 TRPV6Q9H1D0 765 aa17.55■□□□□ 0.4
SS18L1-202ENST00000370848 MTIF3Q9H2K0 278 aaKnown RBP17.55■□□□□ 0.4
SS18L1-202ENST00000370848 CXXC1Q9P0U4 656 aaPredicted RBP17.55■□□□□ 0.4
SS18L1-202ENST00000370848 hCG_1642624A0A1W2PR95 340 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 OPLAHO14841 1288 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 FGBP02675 491 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 SUPT20HL2P0C7V6 817 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 ACRP10323 421 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 KIF5BP33176 963 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 PSMC6P62333 389 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 RAB30Q15771 203 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 C8orf34Q49A92 452 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 NFRKBQ6P4R8 1299 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 CCDC62Q6P9F0 684 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 TMTC3Q6ZXV5 915 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 CCDC82Q8N4S0 544 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 FANCBQ8NB91 859 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 MTG1Q9BT17 334 aaPredicted RBP17.54■□□□□ 0.4
SS18L1-202ENST00000370848 AMNQ9BXJ7 453 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 REV3LO60673 3130 aa17.54■□□□□ 0.4
SS18L1-202ENST00000370848 B4DLN1 442 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 PITPNM1O00562 1244 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 ZBTB43O43298 467 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 CALM1P0DP23 149 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 CALM2P0DP24 149 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 CALM3P0DP25 149 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 PSMA5P28066 241 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 PBX2P40425 430 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 MRPL12P52815 198 aaKnown RBP17.53■□□□□ 0.4
SS18L1-202ENST00000370848 FGD1P98174 961 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 PDE4DQ08499 809 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 SPZ1Q9BXG8 430 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 ZSWIM6Q9HCJ5 1215 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 COL20A1Q9P218 1284 aa17.53■□□□□ 0.4
SS18L1-202ENST00000370848 NAP1L2Q9ULW6 460 aaPredicted RBP17.53■□□□□ 0.4
SS18L1-202ENST00000370848 PNMA6FA0A0J9YX94 578 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 GOLGA8AA7E2F4 631 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 GOLGA8BA8MQT2 603 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 GRXCR1A8MXD5 290 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 CDC27P30260 824 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 SYNE3Q6ZMZ3 975 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 RUFY3Q7L099 469 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 SESTD1Q86VW0 696 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 RPUSD2Q8IZ73 545 aaKnown RBP17.52■□□□□ 0.4
SS18L1-202ENST00000370848 OR6J1Q8NGC5 347 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 LARP6Q9BRS8 491 aaKnown RBP17.52■□□□□ 0.4
SS18L1-202ENST00000370848 FAM217BQ9NTX9 383 aaPredicted RBP17.52■□□□□ 0.4
SS18L1-202ENST00000370848 MRPL11Q9Y3B7 192 aaKnown RBP17.52■□□□□ 0.4
SS18L1-202ENST00000370848 PCDHA1Q9Y5I3 950 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 MYH6P13533 1939 aa17.52■□□□□ 0.4
SS18L1-202ENST00000370848 ARIH2O95376 493 aa17.51■□□□□ 0.39
SS18L1-202ENST00000370848 RFC2P35250 354 aa17.51■□□□□ 0.39
SS18L1-202ENST00000370848 GNAQP50148 359 aa17.51■□□□□ 0.39
SS18L1-202ENST00000370848 TOB2Q14106 344 aaPredicted RBP17.51■□□□□ 0.39
SS18L1-202ENST00000370848 RTN1Q16799 776 aa17.51■□□□□ 0.39
SS18L1-202ENST00000370848 BRDTQ58F21 947 aaPredicted RBP17.51■□□□□ 0.39
SS18L1-202ENST00000370848 USP38Q8NB14 1042 aa17.51■□□□□ 0.39
SS18L1-202ENST00000370848 SYTL5Q8TDW5 730 aaPredicted RBP17.51■□□□□ 0.39
SS18L1-202ENST00000370848 IWS1Q96ST2 819 aa17.51■□□□□ 0.39
SS18L1-202ENST00000370848 AGXT2Q9BYV1 514 aa17.51■□□□□ 0.39
SS18L1-202ENST00000370848 TRMT13Q9NUP7 481 aaKnown RBP17.51■□□□□ 0.39
SS18L1-202ENST00000370848 XIRP2A4UGR9 3374 aa17.51■□□□□ 0.39
SS18L1-202ENST00000370848 CNTNAP5Q8WYK1 1306 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 CCL23P55773 120 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 RBL2Q08999 1139 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 FUT2Q10981 343 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 TTLL4Q14679 1199 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 EMID1Q96A84 441 aaPredicted RBP17.5■□□□□ 0.39
SS18L1-202ENST00000370848 RRP36Q96EU6 259 aaKnown RBP17.5■□□□□ 0.39
SS18L1-202ENST00000370848 TAAR1Q96RJ0 339 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 LZTS2Q9BRK4 669 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 614.4 ms