RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 GREM2Q9H772 168 aa11.09□□□□□ -0.63
HIPK1-206ENST00000369559 NFS1Q9Y697 457 aa11.09□□□□□ -0.63
HIPK1-206ENST00000369559 BCORQ6W2J9 1755 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 NKRFO15226 690 aaKnown RBP eCLIP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 RAD51CO43502 376 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 RPSAP08865 295 aaKnown RBP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 GHRP10912 638 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 HSPA1LP34931 641 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 PPP2R2AP63151 447 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 IRX1P78414 480 aaPredicted RBP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 GFPT1Q06210 699 aaPredicted RBP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 IFIT1BQ5T764 474 aaKnown RBP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 TMTC3Q6ZXV5 915 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 EIF1ADQ8N9N8 165 aaKnown RBP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 CCT6BQ92526 530 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 HVCN1Q96D96 273 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 RSRC1Q96IZ7 334 aaKnown RBP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 ZSCAN10Q96SZ4 725 aaPredicted RBP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 CNTNAP5Q8WYK1 1306 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 ATP2C2O75185 946 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 SLC1A4P43007 532 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 DNA2P51530 1060 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 TNNC1P63316 161 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 PPARDQ03181 441 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 ZNF844Q08AG5 666 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 HLTFQ14527 1009 aaKnown RBP eCLIP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 ASTE1Q2TB18 679 aaPredicted RBP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 ODF2Q5BJF6 829 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 MSL1Q68DK7 614 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 NAIF1Q69YI7 327 aaPredicted RBP11.08□□□□□ -0.64
HIPK1-206ENST00000369559 RRAGAQ7L523 313 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 MAB21L3Q8N8X9 362 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 OR2W6PQ8NHA6 318 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 RAPGEF5Q92565 580 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 ISCUQ9H1K1 167 aa11.08□□□□□ -0.64
HIPK1-206ENST00000369559 PP2D1A8MPX8 630 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 PPP1R12BO60237 982 aaPredicted RBP11.07□□□□□ -0.64
HIPK1-206ENST00000369559 ZPR1O75312 459 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 ATP6V1G2O95670 118 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 CALM1P0DP23 149 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 CALM2P0DP24 149 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 CALM3P0DP25 149 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 MYBP10242 640 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 BRD2P25440 801 aaKnown RBP11.07□□□□□ -0.64
HIPK1-206ENST00000369559 CTNNA1P35221 906 aaKnown RBP11.07□□□□□ -0.64
HIPK1-206ENST00000369559 ELF3P78545 371 aaPredicted RBP11.07□□□□□ -0.64
HIPK1-206ENST00000369559 TROAPQ12815 778 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 VWA3BQ502W6 1294 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 RCSD1Q6JBY9 416 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 CCDC47Q96A33 483 aaKnown RBP11.07□□□□□ -0.64
HIPK1-206ENST00000369559 LRRC45Q96CN5 670 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 HOOK2Q96ED9 719 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 INPP4AQ96PE3 977 aaPredicted RBP11.07□□□□□ -0.64
HIPK1-206ENST00000369559 MMRN2Q9H8L6 949 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 NOD2Q9HC29 1040 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 ALS2Q96Q42 1657 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 PALMO75781 387 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 UBA7P41226 1012 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 PDE4DQ08499 809 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 UAP1Q16222 522 aaPredicted RBP11.07□□□□□ -0.64
HIPK1-206ENST00000369559 DTHD1Q6ZMT9 781 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 CCDC84Q86UT8 332 aaPredicted RBP11.07□□□□□ -0.64
HIPK1-206ENST00000369559 GPIHBP1Q8IV16 184 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 KIRREL3Q8IZU9 778 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 PLIN2Q99541 437 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 NDST4Q9H3R1 872 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 BCCIPQ9P287 314 aaKnown RBP eCLIP11.07□□□□□ -0.64
HIPK1-206ENST00000369559 SSU72P8A0A1W2PR75 194 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 BACH1O14867 736 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 ECHS1P30084 290 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 PPP1R2P41236 205 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 STK4Q13043 487 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 CUL1Q13616 776 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 RASGRF1Q13972 1273 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 ZKSCAN8Q15776 578 aaPredicted RBP11.07□□□□□ -0.64
HIPK1-206ENST00000369559 C11orf91Q3C1V1 193 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 AGBL2Q5U5Z8 902 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 CPLX4Q7Z7G2 160 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 CUL5Q93034 780 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 UBR2Q8IWV8 1755 aa11.07□□□□□ -0.64
HIPK1-206ENST00000369559 TRPM3Q9HCF6 1732 aaPredicted RBP11.06□□□□□ -0.64
HIPK1-206ENST00000369559 ADAMTS3O15072 1205 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 FTCDO95954 541 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 SCG2P13521 617 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 CCDC178Q5BJE1 867 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 SYNE4Q8N205 404 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 USP38Q8NB14 1042 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 BAP1Q92560 729 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 CNOT8Q9UFF9 292 aaKnown RBP11.06□□□□□ -0.64
HIPK1-206ENST00000369559 NHSL1Q5SYE7 1610 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 RBAK-RBAKDNI3L0D1 243 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 PPIP5K2O43314 1243 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 ORC4O43929 436 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 CSB-PGBD3P0DP91 1061 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 PUM3Q15397 648 aaKnown RBP11.06□□□□□ -0.64
HIPK1-206ENST00000369559 ACCSLQ4AC99 568 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 MEI1Q5TIA1 1274 aa11.06□□□□□ -0.64
HIPK1-206ENST00000369559 TMC4Q7Z404 712 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms