RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 NCAPHQ15003 741 aa15.9■□□□□ 0.14
HMGCS2-201ENST00000369406 RRAGBQ5VZM2 374 aa15.9■□□□□ 0.14
HMGCS2-201ENST00000369406 PNMA8AQ86V59 439 aaPredicted RBP15.9■□□□□ 0.14
HMGCS2-201ENST00000369406 SMYD4Q8IYR2 804 aaPredicted RBP15.9■□□□□ 0.14
HMGCS2-201ENST00000369406 HSD3B7Q9H2F3 369 aa15.9■□□□□ 0.14
HMGCS2-201ENST00000369406 PPATQ06203 517 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 LDLRAD1Q5T700 205 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 GADL1Q6ZQY3 521 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 ERO1BQ86YB8 467 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 SMARCE1Q969G3 411 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 OPTNQ96CV9 577 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 TAAR1Q96RJ0 339 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 RNF146Q9NTX7 359 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 TRAF1Q13077 416 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 NMRK2Q9NPI5 230 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 BTBD7Q9P203 1132 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 VAV3Q9UKW4 847 aa15.89■□□□□ 0.13
HMGCS2-201ENST00000369406 ARP10275 920 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 NF2P35240 595 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 TXLNAP40222 546 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 KANK3Q6NY19 840 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 RASSF8Q8NHQ8 419 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 RBM46Q8TBY0 533 aaKnown RBP15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 KBTBD4Q9NVX7 518 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 PCDHA12Q9UN75 941 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 KCNH4Q9UQ05 1017 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 ADCY5O95622 1261 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 ITGB5P18084 799 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 PDIA5Q14554 519 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 TMEM119Q4V9L6 283 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 MCTP2Q6DN12 878 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 SNX29Q8TEQ0 813 aa15.88■□□□□ 0.13
HMGCS2-201ENST00000369406 GTPBP6O43824 516 aaPredicted RBP15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 KLRC4O43908 158 aa15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 MRPS9P82933 396 aaKnown RBP15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 TMEM266Q2M3C6 531 aa15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 NSMFQ6X4W1 530 aa15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 FRMPD4Q14CM0 1322 aa15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 EML1O00423 815 aa15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 MED24O75448 989 aa15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 PLCB2Q00722 1185 aa15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 CCDC173Q0VFZ6 552 aa15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 PPIL2Q13356 520 aa15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 BAATQ14032 418 aaPredicted RBP15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 ZNF526Q8TF50 670 aaPredicted RBP15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 NAP1L4Q99733 375 aaKnown RBP15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 ZNFX1Q9P2E3 1918 aaKnown RBP15.87■□□□□ 0.13
HMGCS2-201ENST00000369406 TRPM7Q96QT4 1865 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 CNMDO75829 334 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 EIF2AK2P19525 551 aaKnown RBP15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 ZNF76P36508 570 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 DHX8Q14562 1220 aaKnown RBP15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 MCM6Q14566 821 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 PLS1Q14651 629 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 GPAT2Q6NUI2 795 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 BPIFA3Q9BQP9 254 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 CTDP1Q9Y5B0 961 aaPredicted RBP15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 POTEB3A0JP26 581 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 ATP2A1O14983 1001 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 MARCH6O60337 910 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 COBLO75128 1261 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 CEP55Q53EZ4 464 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 POTEBQ6S5H4 581 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 RNF207Q6ZRF8 634 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 PLA2G4DQ86XP0 818 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 TRMT44Q8IYL2 757 aaKnown RBP15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 CCDC39Q9UFE4 941 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 HOOK1Q9UJC3 728 aaKnown RBP15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 LRRC37A2A6NM11 1700 aa15.86■□□□□ 0.13
HMGCS2-201ENST00000369406 MEIS1O00470 390 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 ARMC9Q7Z3E5 817 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 TEX13BQ9BXU2 312 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 WDR11Q9BZH6 1224 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 ASCC2Q9H1I8 757 aaPredicted RBP15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 MCM3APO60318 1980 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 ASTN1O14525 1302 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 CXCL11O14625 94 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 TBX3O15119 743 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 CAVIN2O95810 425 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 RPN1P04843 607 aaKnown RBP15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 SPATA31C1P0DKV0 1188 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 HOXA7P31268 230 aaPredicted RBP15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 OAZ1P54368 228 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 MKRN3Q13064 507 aaKnown RBP15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 NCAPH2Q6IBW4 605 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 LBX2Q6XYB7 198 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 MCF2L2Q86YR7 1114 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 PROCA1Q8NCQ7 364 aaPredicted RBP15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 SLC5A5Q92911 643 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 TXNRD2Q9NNW7 524 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 A1CFQ9NQ94 594 aaKnown RBP15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 HOXC10Q9NYD6 342 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 PKD2L1Q9P0L9 805 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 GDAQ9Y2T3 454 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 MYPNQ86TC9 1320 aa15.85■□□□□ 0.13
HMGCS2-201ENST00000369406 POTEFA5A3E0 1075 aa15.84■□□□□ 0.13
HMGCS2-201ENST00000369406 MYMKA6NI61 221 aa15.84■□□□□ 0.13
HMGCS2-201ENST00000369406 PPP1R3GB7ZBB8 358 aa15.84■□□□□ 0.13
HMGCS2-201ENST00000369406 E9PMD0 336 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms