RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 H0YC42 278 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 C2orf54Q08AI8 447 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 IKBKBO14920 756 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 CENPUQ71F23 418 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 PCGF5Q86SE9 256 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 MORC2Q9Y6X9 1032 aaPredicted RBP12.97□□□□□ -0.33
GFRA1-203ENST00000369236 RGS12O14924 1447 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 CFAP43Q8NDM7 1665 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 BRD1O95696 1058 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 TAC1P20366 129 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 CCND1P24385 295 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 TTBK2Q6IQ55 1244 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 LCMT1Q9UIC8 334 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 GOLGA8RI6L899 631 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 RPN1P04843 607 aaKnown RBP12.97□□□□□ -0.33
GFRA1-203ENST00000369236 COPB1P53618 953 aaKnown RBP12.97□□□□□ -0.33
GFRA1-203ENST00000369236 ZNF555Q8NEP9 628 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 SMYD3Q9H7B4 428 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 NLRC4Q9NPP4 1024 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 SYNGAP1Q96PV0 1343 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 OATP04181 439 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 SNRPA1P09661 255 aaKnown RBP12.97□□□□□ -0.33
GFRA1-203ENST00000369236 H2AFZP0C0S5 128 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 IGBP1P78318 339 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 RASSF7Q02833 373 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 INAQ16352 499 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 KIF19Q2TAC6 998 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 H2AFVQ71UI9 128 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 TXNDC2Q86VQ3 553 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 PDP2Q9P2J9 529 aa12.97□□□□□ -0.33
GFRA1-203ENST00000369236 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.97□□□□□ -0.33
GFRA1-203ENST00000369236 KCNA3P22001 575 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 CAPN12Q6ZSI9 719 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 NCLNQ969V3 563 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 MCM9Q9NXL9 1143 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 SKA2Q8WVK7 121 aaPredicted RBP12.96□□□□□ -0.33
GFRA1-203ENST00000369236 CUEDC2Q9H467 287 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 STK17AQ9UEE5 414 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 CFLARO15519 480 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 CDR2LQ86X02 465 aaPredicted RBP12.96□□□□□ -0.33
GFRA1-203ENST00000369236 BRD8Q9H0E9 1235 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 ZMYND8Q9ULU4 1186 aaPredicted RBP12.96□□□□□ -0.33
GFRA1-203ENST00000369236 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 RASSF3Q86WH2 238 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 DCLK2Q8N568 766 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 PLAAQ9Y263 795 aa12.96□□□□□ -0.33
GFRA1-203ENST00000369236 RNF103-CHMP3A0A140T963 221 aa12.96□□□□□ -0.34
GFRA1-203ENST00000369236 PLTPP55058 493 aa12.96□□□□□ -0.34
GFRA1-203ENST00000369236 SRLQ86TD4 932 aa12.96□□□□□ -0.34
GFRA1-203ENST00000369236 KRT37O76014 449 aa12.96□□□□□ -0.34
GFRA1-203ENST00000369236 CNGA2Q16280 664 aa12.96□□□□□ -0.34
GFRA1-203ENST00000369236 PTCD1O75127 700 aaKnown RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 TNNI1P19237 187 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 PPP2R2AP63151 447 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 TRIM16LQ309B1 348 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 PPP6R3Q5H9R7 873 aaPredicted RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 TRMT44Q8IYL2 757 aaKnown RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 ATP6V1E2Q96A05 226 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 ZNF839A8K0R7 811 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 CAPN9O14815 690 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 CCDC22O60826 627 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 SNAPC4Q5SXM2 1469 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 MYL1P05976 194 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 IL10P22301 178 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 CA4P22748 312 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 A0A0G2JND7 137 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 PFKFB1P16118 471 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 AOC3Q16853 763 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 HACE1Q8IYU2 909 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 MRPL50Q8N5N7 158 aaKnown RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 PPARGC1AQ9UBK2 798 aaKnown RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 LRWD1Q9UFC0 647 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 TROQ12816 1431 aaPredicted RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 ENO4A6NNW6 628 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 CD19P15391 556 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 ABCD1P33897 745 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 KIF23Q02241 960 aaPredicted RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 ST13P5Q8NFI4 369 aaPredicted RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 FAM167BQ9BTA0 163 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 CCDC90BQ9GZT6 254 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 USP40Q9NVE5 1235 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 TBK1Q9UHD2 729 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 CCDC188H7C350 402 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 HSPA13P48723 471 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 ADCY7P51828 1080 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 NOVA2Q9UNW9 492 aaKnown RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 IQSEC3Q9UPP2 1182 aaPredicted RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 CAPN1P07384 714 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 CMA1P23946 247 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 SLFN12Q8IYM2 578 aa12.95□□□□□ -0.34
GFRA1-203ENST00000369236 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 ELAC2Q9BQ52 826 aaKnown RBP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 AATFQ9NY61 560 aaKnown RBP eCLIP12.95□□□□□ -0.34
GFRA1-203ENST00000369236 POTEAQ6S8J7 498 aa12.94□□□□□ -0.34
GFRA1-203ENST00000369236 CCDC103Q8IW40 242 aa12.94□□□□□ -0.34
GFRA1-203ENST00000369236 ZNF212Q9UDV6 495 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms