RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 PPIL2Q13356 520 aa29.71■■■□□ 2.35
EFNA1-202ENST00000368407 APTXQ7Z2E3 356 aaKnown RBP29.71■■■□□ 2.35
EFNA1-202ENST00000368407 DHX58Q96C10 678 aa29.71■■■□□ 2.35
EFNA1-202ENST00000368407 hCG_1642624A0A1W2PR95 340 aa29.7■■■□□ 2.34
EFNA1-202ENST00000368407 C19orf81C9J6K1 198 aa29.7■■■□□ 2.34
EFNA1-202ENST00000368407 FOXN1O15353 648 aa29.7■■■□□ 2.34
EFNA1-202ENST00000368407 POLR2DO15514 142 aaKnown RBP29.7■■■□□ 2.34
EFNA1-202ENST00000368407 VCAM1P19320 739 aa29.7■■■□□ 2.34
EFNA1-202ENST00000368407 SAPCD2Q86UD0 394 aa29.7■■■□□ 2.34
EFNA1-202ENST00000368407 LPAR1Q92633 364 aa29.7■■■□□ 2.34
EFNA1-202ENST00000368407 ADGRG1Q9Y653 693 aa29.7■■■□□ 2.34
EFNA1-202ENST00000368407 ADKP55263 362 aaKnown RBP29.69■■■□□ 2.34
EFNA1-202ENST00000368407 CCDC12Q8WUD4 166 aaPredicted RBP29.69■■■□□ 2.34
EFNA1-202ENST00000368407 MYO1AQ9UBC5 1043 aa29.69■■■□□ 2.34
EFNA1-202ENST00000368407 CDC23Q9UJX2 597 aa29.69■■■□□ 2.34
EFNA1-202ENST00000368407 BTBD18B2RXH4 712 aa29.69■■■□□ 2.34
EFNA1-202ENST00000368407 IRX5P78411 483 aaPredicted RBP29.69■■■□□ 2.34
EFNA1-202ENST00000368407 FSTL1Q12841 308 aa29.69■■■□□ 2.34
EFNA1-202ENST00000368407 CDKAL1Q5VV42 579 aa29.69■■■□□ 2.34
EFNA1-202ENST00000368407 SH3RF1Q7Z6J0 888 aa29.69■■■□□ 2.34
EFNA1-202ENST00000368407 KCNH4Q9UQ05 1017 aa29.69■■■□□ 2.34
EFNA1-202ENST00000368407 BAZ2BQ9UIF8 2168 aaKnown RBP29.68■■■□□ 2.34
EFNA1-202ENST00000368407 PRR29P0C7W0 189 aa29.68■■■□□ 2.34
EFNA1-202ENST00000368407 SH3D19Q5HYK7 790 aa29.68■■■□□ 2.34
EFNA1-202ENST00000368407 C12orf42Q96LP6 360 aa29.68■■■□□ 2.34
EFNA1-202ENST00000368407 MED15Q96RN5 788 aa29.68■■■□□ 2.34
EFNA1-202ENST00000368407 MYH6P13533 1939 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 KIF5CO60282 957 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 CHMP4BP1P59074 171 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 MKRN3Q13064 507 aaKnown RBP29.67■■■□□ 2.34
EFNA1-202ENST00000368407 LONRF2Q1L5Z9 754 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 PPFIBP1Q86W92 1011 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 IQUBQ8NA54 791 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 WNK4Q96J92 1243 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 LZTS2Q9BRK4 669 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 VAT1LQ9HCJ6 419 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 TMEM51Q9NW97 253 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 V9GY48 417 aaPredicted RBP29.67■■■□□ 2.34
EFNA1-202ENST00000368407 CXCL11O14625 94 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 WDR46O15213 610 aaKnown RBP29.67■■■□□ 2.34
EFNA1-202ENST00000368407 CNGA4Q8IV77 575 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 SPZ1Q9BXG8 430 aa29.67■■■□□ 2.34
EFNA1-202ENST00000368407 MRPL44Q9H9J2 332 aaKnown RBP29.67■■■□□ 2.34
EFNA1-202ENST00000368407 A0A0G2JLL6 359 aaPredicted RBP29.66■■■□□ 2.34
EFNA1-202ENST00000368407 ERLIN1O75477 346 aa29.66■■■□□ 2.34
EFNA1-202ENST00000368407 PRRT2Q7Z6L0 340 aaPredicted RBP29.66■■■□□ 2.34
EFNA1-202ENST00000368407 GSDMAQ96QA5 445 aa29.66■■■□□ 2.34
EFNA1-202ENST00000368407 RPAP3Q9H6T3 665 aaPredicted RBP29.66■■■□□ 2.34
EFNA1-202ENST00000368407 FBXO28Q9NVF7 368 aa29.66■■■□□ 2.34
EFNA1-202ENST00000368407 TMOD4Q9NZQ9 345 aa29.66■■■□□ 2.34
EFNA1-202ENST00000368407 ADD3Q9UEY8 706 aaKnown RBP29.66■■■□□ 2.34
EFNA1-202ENST00000368407 IKQ13123 557 aaPredicted RBP29.65■■■□□ 2.34
EFNA1-202ENST00000368407 CUL4BQ13620 913 aa29.65■■■□□ 2.34
EFNA1-202ENST00000368407 FILIP1LQ4L180 1135 aa29.65■■■□□ 2.34
EFNA1-202ENST00000368407 ADGRF4Q8IZF3 695 aa29.65■■■□□ 2.34
EFNA1-202ENST00000368407 RNF26Q9BY78 433 aaPredicted RBP29.65■■■□□ 2.34
EFNA1-202ENST00000368407 RIOX1Q9H6W3 641 aa29.65■■■□□ 2.34
EFNA1-202ENST00000368407 FAM177A1Q8N128 213 aaPredicted RBP29.65■■■□□ 2.34
EFNA1-202ENST00000368407 SAMSN1Q9NSI8 373 aaKnown RBP29.65■■■□□ 2.34
EFNA1-202ENST00000368407 TLL2Q9Y6L7 1015 aa29.65■■■□□ 2.34
EFNA1-202ENST00000368407 SYNRGQ9UMZ2 1314 aa29.64■■■□□ 2.34
EFNA1-202ENST00000368407 TMEM88BA6NKF7 163 aa29.64■■■□□ 2.34
EFNA1-202ENST00000368407 POLR3GO15318 223 aaPredicted RBP29.64■■■□□ 2.34
EFNA1-202ENST00000368407 PRPF3O43395 683 aaKnown RBP29.64■■■□□ 2.34
EFNA1-202ENST00000368407 MFAP3LO75121 409 aa29.64■■■□□ 2.34
EFNA1-202ENST00000368407 STAT2P52630 851 aa29.64■■■□□ 2.34
EFNA1-202ENST00000368407 FERMT2Q96AC1 680 aa29.64■■■□□ 2.34
EFNA1-202ENST00000368407 GBP3Q9H0R5 595 aa29.64■■■□□ 2.34
EFNA1-202ENST00000368407 CWC15Q9P013 229 aaKnown RBP29.64■■■□□ 2.34
EFNA1-202ENST00000368407 SMARCA1P28370 1054 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 TRIM14Q14142 442 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 PKN1Q16512 942 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 BTNL9Q6UXG8 535 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 TANGO6Q9C0B7 1094 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 JMJD4Q9H9V9 463 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 WHAMMP3Q1A5X7 153 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 TREML2Q5T2D2 321 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 SPRYD7Q5W111 196 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 SAMD1Q6SPF0 538 aaPredicted RBP29.63■■■□□ 2.33
EFNA1-202ENST00000368407 GADL1Q6ZQY3 521 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 HDXQ7Z353 690 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 IGSF22Q8N9C0 903 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 GOLGA5Q8TBA6 731 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 PIGSQ96S52 555 aa29.63■■■□□ 2.33
EFNA1-202ENST00000368407 PYM1Q9BRP8 204 aaKnown RBP29.63■■■□□ 2.33
EFNA1-202ENST00000368407 ABT1Q9ULW3 272 aaKnown RBP29.63■■■□□ 2.33
EFNA1-202ENST00000368407 PTPRFP10586 1907 aa29.62■■■□□ 2.33
EFNA1-202ENST00000368407 EIF3JO75822 258 aaKnown RBP29.62■■■□□ 2.33
EFNA1-202ENST00000368407 ZNF157P51786 506 aaPredicted RBP29.62■■■□□ 2.33
EFNA1-202ENST00000368407 MOGSQ13724 837 aa29.62■■■□□ 2.33
EFNA1-202ENST00000368407 SYDE2Q5VT97 1194 aa29.62■■■□□ 2.33
EFNA1-202ENST00000368407 PCDHB6Q9Y5E3 794 aa29.62■■■□□ 2.33
EFNA1-202ENST00000368407 SNAP25P60880 206 aa29.61■■■□□ 2.33
EFNA1-202ENST00000368407 AKAP17AQ02040 695 aaKnown RBP29.61■■■□□ 2.33
EFNA1-202ENST00000368407 GRIN1Q05586 938 aa29.61■■■□□ 2.33
EFNA1-202ENST00000368407 SNAPC2Q13487 334 aa29.61■■■□□ 2.33
EFNA1-202ENST00000368407 RAD9BQ6WBX8 426 aa29.61■■■□□ 2.33
EFNA1-202ENST00000368407 TMTC1Q8IUR5 882 aa29.61■■■□□ 2.33
EFNA1-202ENST00000368407 TRMT44Q8IYL2 757 aaKnown RBP29.61■■■□□ 2.33
EFNA1-202ENST00000368407 FEM1BQ9UK73 627 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms