RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 Q9Y3F1 56 aa21.39■■□□□ 1.02
LMNA-204ENST00000368298 ADCY6O43306 1168 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 TFRCP02786 760 aaKnown RBP21.39■■□□□ 1.01
LMNA-204ENST00000368298 RARBP10826 455 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 XBP1P17861 261 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 ADCYAP1R1P41586 468 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 NLRP5P59047 1200 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 NKX3-2P78367 333 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 MRPS9P82933 396 aaKnown RBP21.39■■□□□ 1.01
LMNA-204ENST00000368298 TNFAIP2Q03169 654 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 NPY5RQ15761 445 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 REXO1Q8N1G1 1221 aaKnown RBP21.39■■□□□ 1.01
LMNA-204ENST00000368298 SCFD2Q8WU76 684 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 ALG1Q9BT22 464 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 PCDHA4Q9UN74 947 aa21.39■■□□□ 1.01
LMNA-204ENST00000368298 GNEQ9Y223 722 aaKnown RBP21.39■■□□□ 1.01
LMNA-204ENST00000368298 M0R2N6 131 aa21.38■■□□□ 1.01
LMNA-204ENST00000368298 ADAMTS3O15072 1205 aa21.38■■□□□ 1.01
LMNA-204ENST00000368298 RGS20O76081 388 aa21.38■■□□□ 1.01
LMNA-204ENST00000368298 HMGN5P82970 282 aaKnown RBP21.38■■□□□ 1.01
LMNA-204ENST00000368298 DUSP28Q4G0W2 176 aa21.38■■□□□ 1.01
LMNA-204ENST00000368298 EHMT1Q9H9B1 1298 aa21.38■■□□□ 1.01
LMNA-204ENST00000368298 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.37■■□□□ 1.01
LMNA-204ENST00000368298 DTNBO60941 627 aa21.37■■□□□ 1.01
LMNA-204ENST00000368298 MYCLP12524 364 aaPredicted RBP21.37■■□□□ 1.01
LMNA-204ENST00000368298 SMPD1P17405 629 aa21.37■■□□□ 1.01
LMNA-204ENST00000368298 CCDC62Q6P9F0 684 aa21.37■■□□□ 1.01
LMNA-204ENST00000368298 UBE2Q1Q7Z7E8 422 aa21.37■■□□□ 1.01
LMNA-204ENST00000368298 CRYGNQ8WXF5 182 aa21.37■■□□□ 1.01
LMNA-204ENST00000368298 INPP4AQ96PE3 977 aaPredicted RBP21.37■■□□□ 1.01
LMNA-204ENST00000368298 ANO3Q9BYT9 981 aa21.37■■□□□ 1.01
LMNA-204ENST00000368298 WDR11Q9BZH6 1224 aa21.37■■□□□ 1.01
LMNA-204ENST00000368298 UPF3AQ9H1J1 476 aaKnown RBP21.37■■□□□ 1.01
LMNA-204ENST00000368298 TMEM260Q9NX78 707 aa21.37■■□□□ 1.01
LMNA-204ENST00000368298 NKRFO15226 690 aaKnown RBP eCLIP21.36■■□□□ 1.01
LMNA-204ENST00000368298 SREBF1P36956 1147 aa21.36■■□□□ 1.01
LMNA-204ENST00000368298 MNX1P50219 401 aaPredicted RBP21.36■■□□□ 1.01
LMNA-204ENST00000368298 ANO1Q5XXA6 986 aa21.36■■□□□ 1.01
LMNA-204ENST00000368298 KCNV1Q6PIU1 500 aa21.36■■□□□ 1.01
LMNA-204ENST00000368298 BLIDQ8IZY5 108 aa21.36■■□□□ 1.01
LMNA-204ENST00000368298 ARRDC4Q8NCT1 418 aa21.36■■□□□ 1.01
LMNA-204ENST00000368298 XPNPEP3Q9NQH7 507 aa21.36■■□□□ 1.01
LMNA-204ENST00000368298 ADAMTS4O75173 837 aa21.35■■□□□ 1.01
LMNA-204ENST00000368298 TGFB3P10600 412 aa21.35■■□□□ 1.01
LMNA-204ENST00000368298 GJA9P57773 515 aa21.35■■□□□ 1.01
LMNA-204ENST00000368298 TTLL4Q14679 1199 aa21.35■■□□□ 1.01
LMNA-204ENST00000368298 HSCBQ8IWL3 235 aa21.35■■□□□ 1.01
LMNA-204ENST00000368298 SNX21Q969T3 373 aa21.35■■□□□ 1.01
LMNA-204ENST00000368298 SYNRGQ9UMZ2 1314 aa21.34■■□□□ 1.01
LMNA-204ENST00000368298 TXNP10599 105 aaKnown RBP21.34■■□□□ 1.01
LMNA-204ENST00000368298 ICAM3P32942 547 aa21.34■■□□□ 1.01
LMNA-204ENST00000368298 CUL4AQ13619 759 aa21.34■■□□□ 1.01
LMNA-204ENST00000368298 JAKMIP3Q5VZ66 844 aa21.34■■□□□ 1.01
LMNA-204ENST00000368298 SEPT14Q6ZU15 432 aa21.34■■□□□ 1.01
LMNA-204ENST00000368298 LENG1Q96BZ8 264 aaPredicted RBP21.34■■□□□ 1.01
LMNA-204ENST00000368298 GJB4Q9NTQ9 266 aa21.34■■□□□ 1.01
LMNA-204ENST00000368298 KCNJ14Q9UNX9 436 aa21.34■■□□□ 1.01
LMNA-204ENST00000368298 UBIAD1Q9Y5Z9 338 aa21.34■■□□□ 1.01
LMNA-204ENST00000368298 DNM1LO00429 736 aa21.33■■□□□ 1.01
LMNA-204ENST00000368298 ARIH2O95376 493 aa21.33■■□□□ 1.01
LMNA-204ENST00000368298 CYP3A4P08684 503 aa21.33■■□□□ 1.01
LMNA-204ENST00000368298 CST5P28325 142 aaPredicted RBP21.33■■□□□ 1.01
LMNA-204ENST00000368298 LRRC41Q15345 812 aa21.33■■□□□ 1.01
LMNA-204ENST00000368298 GNPTABQ3T906 1256 aa21.33■■□□□ 1.01
LMNA-204ENST00000368298 TMEM63BQ5T3F8 832 aa21.33■■□□□ 1.01
LMNA-204ENST00000368298 KLHDC9Q8NEP7 349 aa21.33■■□□□ 1.01
LMNA-204ENST00000368298 DDX41Q9UJV9 622 aaKnown RBP21.33■■□□□ 1.01
LMNA-204ENST00000368298 SPATA31C2B4DYI2 1134 aa21.32■■□□□ 1
LMNA-204ENST00000368298 CTAGE5O15320 804 aa21.32■■□□□ 1
LMNA-204ENST00000368298 PGK1P00558 417 aa21.32■■□□□ 1
LMNA-204ENST00000368298 ARHGAP4P98171 946 aa21.32■■□□□ 1
LMNA-204ENST00000368298 CCSAPQ6IQ19 270 aaPredicted RBP21.32■■□□□ 1
LMNA-204ENST00000368298 RASGRP4Q8TDF6 673 aa21.32■■□□□ 1
LMNA-204ENST00000368298 GPRASP2Q96D09 838 aa21.32■■□□□ 1
LMNA-204ENST00000368298 PGBD1Q96JS3 809 aa21.32■■□□□ 1
LMNA-204ENST00000368298 TSEN34Q9BSV6 310 aaKnown RBP21.32■■□□□ 1
LMNA-204ENST00000368298 TNRC18O15417 2968 aaPredicted RBP21.32■■□□□ 1
LMNA-204ENST00000368298 MAFGO15525 162 aa21.32■■□□□ 1
LMNA-204ENST00000368298 MMP1P03956 469 aa21.32■■□□□ 1
LMNA-204ENST00000368298 COL6A1P12109 1028 aa21.32■■□□□ 1
LMNA-204ENST00000368298 ITGB5P18084 799 aa21.32■■□□□ 1
LMNA-204ENST00000368298 RNF180Q86T96 592 aa21.32■■□□□ 1
LMNA-204ENST00000368298 TLK2Q86UE8 772 aa21.32■■□□□ 1
LMNA-204ENST00000368298 SPC25Q9HBM1 224 aa21.32■■□□□ 1
LMNA-204ENST00000368298 RTEL1Q9NZ71 1219 aa21.32■■□□□ 1
LMNA-204ENST00000368298 MYH7BA7E2Y1 1941 aa21.31■■□□□ 1
LMNA-204ENST00000368298 FIBPO43427 364 aa21.31■■□□□ 1
LMNA-204ENST00000368298 FARP2O94887 1054 aaPredicted RBP21.31■■□□□ 1
LMNA-204ENST00000368298 TRIM29Q14134 588 aa21.31■■□□□ 1
LMNA-204ENST00000368298 LY6KQ17RY6 165 aa21.31■■□□□ 1
LMNA-204ENST00000368298 KRT40Q6A162 431 aa21.31■■□□□ 1
LMNA-204ENST00000368298 NLRX1Q86UT6 975 aa21.31■■□□□ 1
LMNA-204ENST00000368298 EMID1Q96A84 441 aaPredicted RBP21.31■■□□□ 1
LMNA-204ENST00000368298 ZFP91Q96JP5 570 aaPredicted RBP21.31■■□□□ 1
LMNA-204ENST00000368298 MXRA8Q9BRK3 442 aa21.31■■□□□ 1
LMNA-204ENST00000368298 JADE2Q9NQC1 790 aa21.31■■□□□ 1
LMNA-204ENST00000368298 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.31■■□□□ 1
LMNA-204ENST00000368298 MRVI1Q9Y6F6 885 aa21.31■■□□□ 1
LMNA-204ENST00000368298 K7ELQ4 463 aaPredicted RBP21.3■■□□□ 1
LMNA-204ENST00000368298 DYNC1LI2O43237 492 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms