RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CPB1P15086 417 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 EIF2AK2P19525 551 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 RPS8P62241 208 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 ORC1Q13415 861 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 RASA3Q14644 834 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 CCDC85BQ15834 202 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 PROSER3Q2NL68 480 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 AKNAD1Q5T1N1 836 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 ALG1LQ6GMV1 187 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 ELMSAN1Q6PJG2 1045 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 KIF6Q6ZMV9 814 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 CHSY3Q70JA7 882 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 CERS5Q8N5B7 392 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 ZBTB38Q8NAP3 1195 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 PRMT6Q96LA8 375 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 KIF2CQ99661 725 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 USP26Q9BXU7 913 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 LTBP2Q14767 1821 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 FAM186AA6NE01 2351 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 ZFYVE26Q68DK2 2539 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 PI4K2BG5E9Z4 385 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 PDHXO00330 501 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 PIK3R2O00459 728 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 ERC2O15083 957 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 RAB11FIP3O75154 756 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 RGS9O75916 674 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 CYP2C8P10632 490 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 CETPP11597 493 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 MCCP23508 829 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 DCTN1Q14203 1278 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 SUPT20HL1Q3ZLR7 823 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 HSP90AB4PQ58FF6 505 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 STRIP1Q5VSL9 837 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 C1orf229Q6ZS94 237 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 HFE2Q6ZVN8 426 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 MCM10Q7L590 875 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 GALNT12Q8IXK2 581 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 CACTIN-AS1Q8N1I8 211 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 FBF1Q8TES7 1133 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 WHAMMQ8TF30 809 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 TTC9Q92623 222 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 KANSL3Q9P2N6 904 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 TSPYL4Q9UJ04 414 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 PPP2R3BQ9Y5P8 575 aa7.72□□□□□ -1.17
ECHDC1-202ENST00000368289 PNMA6FA0A0J9YX94 578 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 J3QW42 95 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 ZZEF1O43149 2961 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 SMNDC1O75940 238 aaKnown RBP eCLIP7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 ANXA1P04083 346 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 KLRK1P26718 216 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 ATP8B2P98198 1209 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 TAF7Q15545 349 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 ENOX2Q16206 610 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 KLHL40Q2TBA0 621 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 GPAT2Q6NUI2 795 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 PSAPL1Q6NUJ1 521 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 NPAS4Q8IUM7 802 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 ANP32BQ92688 251 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 TNPO1Q92973 898 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 ZNF576Q9H609 170 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 TRMT112Q9UI30 125 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 SH3TC1Q8TE82 1336 aa7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 PRRC2BQ5JSZ5 2229 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-202ENST00000368289 SPTBN2O15020 2390 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 ELL2O00472 640 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 ARHGEF15O94989 841 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 ITGB8P26012 769 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 FCGRTP55899 365 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 MAP3K21Q5TCX8 1036 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 ANKRD23Q86SG2 305 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 CEP120Q8N960 986 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 ZKSCAN4Q969J2 545 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 CCDC74AQ96AQ1 378 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 PLD4Q96BZ4 506 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 FAM89AQ96GI7 184 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 INTS4Q96HW7 963 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 PRDM12Q9H4Q4 367 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 GJD2Q9UKL4 321 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 MGAMO43451 1857 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 MAP1BP46821 2468 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 AK9Q5TCS8 1911 aa7.7□□□□□ -1.18
ECHDC1-202ENST00000368289 BPTFQ12830 3046 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 SHISA8B8ZZ34 492 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 LILRB5O75023 590 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 LDHBP07195 334 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 P4HBP07237 508 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 XRCC6P12956 609 aaKnown RBP eCLIP7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 GSPT1P15170 499 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 SDSP20132 328 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 SNAPC2Q13487 334 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 HS1BP3Q53T59 392 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 PERM1Q5SV97 790 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 BADQ92934 168 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 FRMD6Q96NE9 622 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 LBHD1Q9BQE6 289 aaPredicted RBP7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 LRRCC1Q9C099 1032 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 SMG9Q9H0W8 520 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 GRPEL1Q9HAV7 217 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 DAGLAQ9Y4D2 1042 aa7.69□□□□□ -1.18
ECHDC1-202ENST00000368289 TRIM43BA6NCK2 446 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms