RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 CHFRQ96EP1 664 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 ZDHHC15Q96MV8 337 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 C8orf37Q96NL8 207 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 SIT1Q9Y3P8 196 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 PMS1P54277 932 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 EPHB4P54760 987 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 ITGA1P56199 1179 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 ANKRD39Q53RE8 183 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 PRAMEF18Q5VWM3 479 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 FBXW10Q5XX13 1052 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 EEF1DP3Q658K8 133 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 RCSD1Q6JBY9 416 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 ZC3H18Q86VM9 953 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 FAM26EQ8N5C1 309 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 FERD3LQ96RJ6 166 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 MTA3Q9BTC8 594 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 NOL6Q9H6R4 1146 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 GULP1Q9UBP9 304 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 TESMINQ9Y4I5 508 aa5.51□□□□□ -1.53
ECHDC1-201ENST00000368287 PATE3B3GLJ2 98 aa5.5□□□□□ -1.53
ECHDC1-201ENST00000368287 GJA8P48165 433 aa5.5□□□□□ -1.53
ECHDC1-201ENST00000368287 PPP2CBP62714 309 aa5.5□□□□□ -1.53
ECHDC1-201ENST00000368287 PPP2CAP67775 309 aa5.5□□□□□ -1.53
ECHDC1-201ENST00000368287 RASGRP4Q8TDF6 673 aa5.5□□□□□ -1.53
ECHDC1-201ENST00000368287 CPLX3Q8WVH0 158 aa5.5□□□□□ -1.53
ECHDC1-201ENST00000368287 WWC2-AS2Q96NR7 200 aa5.5□□□□□ -1.53
ECHDC1-201ENST00000368287 CRBNQ96SW2 442 aa5.5□□□□□ -1.53
ECHDC1-201ENST00000368287 EFR3BQ9Y2G0 817 aa5.5□□□□□ -1.53
ECHDC1-201ENST00000368287 ZNF623O75123 536 aa5.49□□□□□ -1.53
ECHDC1-201ENST00000368287 NTRK1P04629 796 aa5.49□□□□□ -1.53
ECHDC1-201ENST00000368287 ITGA4P13612 1032 aa5.49□□□□□ -1.53
ECHDC1-201ENST00000368287 CD247P20963 164 aa5.49□□□□□ -1.53
ECHDC1-201ENST00000368287 ABHD18Q0P651 414 aa5.49□□□□□ -1.53
ECHDC1-201ENST00000368287 AXDND1Q5T1B0 1012 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-201ENST00000368287 PPFIBP1Q86W92 1011 aa5.49□□□□□ -1.53
ECHDC1-201ENST00000368287 DCP2Q8IU60 420 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-201ENST00000368287 SEC16BQ96JE7 1060 aa5.49□□□□□ -1.53
ECHDC1-201ENST00000368287 PPP1R11O60927 126 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-201ENST00000368287 ZNF28P17035 718 aa5.48□□□□□ -1.53
ECHDC1-201ENST00000368287 SLFN13Q68D06 897 aa5.48□□□□□ -1.53
ECHDC1-201ENST00000368287 MIB1Q86YT6 1006 aa5.48□□□□□ -1.53
ECHDC1-201ENST00000368287 CEP89Q96ST8 783 aa5.48□□□□□ -1.53
ECHDC1-201ENST00000368287 AP5M1Q9H0R1 490 aa5.48□□□□□ -1.53
ECHDC1-201ENST00000368287 TMEM168Q9H0V1 697 aa5.48□□□□□ -1.53
ECHDC1-201ENST00000368287 L2HGDHQ9H9P8 463 aa5.48□□□□□ -1.53
ECHDC1-201ENST00000368287 GINM1Q9NU53 330 aa5.48□□□□□ -1.53
ECHDC1-201ENST00000368287 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.48□□□□□ -1.53
ECHDC1-201ENST00000368287 AURKAO14965 403 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 TP53P04637 393 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 SOX9P48436 509 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 FOXE3Q13461 319 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 PPP2R5DQ14738 602 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 INTS3Q68E01 1043 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 CPNE8Q86YQ8 564 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 MBD6Q96DN6 1003 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 PTPN18Q99952 460 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 FAM86C1Q9NVL1 165 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 STRIP2Q9ULQ0 834 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 ZNRF3Q9ULT6 936 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 ZNF451Q9Y4E5 1061 aa5.47□□□□□ -1.53
ECHDC1-201ENST00000368287 STXBP3O00186 592 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 ZNF202O95125 648 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 FUCA1P04066 466 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 DNAJA1P31689 397 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 NASPP49321 788 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 SEPHS1P49903 392 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 EIF6P56537 245 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 RBM10P98175 930 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 ARID5AQ03989 594 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 HS1BP3Q53T59 392 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 PKN3Q6P5Z2 889 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 KBTBD2Q8IY47 623 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 SLC43A3Q8NBI5 491 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 Q8TCH9 128 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 YTHDC1Q96MU7 727 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 PPT2Q9UMR5 302 aa5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 DIS3Q9Y2L1 958 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-201ENST00000368287 NPHS1O60500 1241 aa5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 SSBP05455 408 aaKnown RBP eCLIP5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 ATF4P18848 351 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 NANOS3P60323 173 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 MIIPQ5JXC2 388 aa5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 MCF2L2Q86YR7 1114 aa5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 RBBP8NLQ8NC74 664 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 OR6P1Q8NGX9 317 aa5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 TM9SF2Q99805 663 aa5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 MCMBPQ9BTE3 642 aa5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 IKZF4Q9H2S9 585 aa5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 USP35Q9P2H5 1018 aa5.45□□□□□ -1.54
ECHDC1-201ENST00000368287 A0A087WZG4 1122 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 B4GALT4O60513 344 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 FGRP09769 529 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 PAMP19021 973 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 IL13P35225 146 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 STAT5AP42229 794 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 DPTQ07507 201 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 PRKD1Q15139 912 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 TCEAL1Q15170 157 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 CCDC81Q6ZN84 652 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 RNF207Q6ZRF8 634 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms