RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 LRRC55Q6ZSA7 311 aa15.87■□□□□ 0.13
CD48-201ENST00000368045 NEK11Q8NG66 645 aa15.87■□□□□ 0.13
CD48-201ENST00000368045 GOLGA5Q8TBA6 731 aa15.87■□□□□ 0.13
CD48-201ENST00000368045 TBC1D16Q8TBP0 767 aa15.87■□□□□ 0.13
CD48-201ENST00000368045 CAGE1Q8TC20 777 aa15.87■□□□□ 0.13
CD48-201ENST00000368045 CRAMP1Q96RY5 1269 aa15.87■□□□□ 0.13
CD48-201ENST00000368045 IFIH1Q9BYX4 1025 aaKnown RBP15.87■□□□□ 0.13
CD48-201ENST00000368045 SH2D4AQ9H788 454 aa15.87■□□□□ 0.13
CD48-201ENST00000368045 VPS18Q9P253 973 aa15.87■□□□□ 0.13
CD48-201ENST00000368045 SNX12Q9UMY4 172 aa15.87■□□□□ 0.13
CD48-201ENST00000368045 PCDHA13Q9Y5I0 950 aa15.87■□□□□ 0.13
CD48-201ENST00000368045 FRMPD2Q68DX3 1309 aaPredicted RBP15.86■□□□□ 0.13
CD48-201ENST00000368045 KDM3AQ9Y4C1 1321 aa15.86■□□□□ 0.13
CD48-201ENST00000368045 EDIL3O43854 480 aa15.86■□□□□ 0.13
CD48-201ENST00000368045 TOM1O60784 492 aa15.86■□□□□ 0.13
CD48-201ENST00000368045 MRPL12P52815 198 aaKnown RBP15.86■□□□□ 0.13
CD48-201ENST00000368045 MMGT1Q8N4V1 131 aa15.86■□□□□ 0.13
CD48-201ENST00000368045 CCDC155Q8N6L0 562 aa15.86■□□□□ 0.13
CD48-201ENST00000368045 DDX12PQ92771 950 aa15.86■□□□□ 0.13
CD48-201ENST00000368045 CUL5Q93034 780 aa15.86■□□□□ 0.13
CD48-201ENST00000368045 COA7Q96BR5 231 aa15.86■□□□□ 0.13
CD48-201ENST00000368045 CWC15Q9P013 229 aaKnown RBP15.86■□□□□ 0.13
CD48-201ENST00000368045 SSU72P8A0A1W2PR75 194 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 ZNF263O14978 683 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 PJA2O43164 708 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 KIF11P52732 1056 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
CD48-201ENST00000368045 C2CD5Q86YS7 1000 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 MYOCDQ8IZQ8 938 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 SYN2Q92777 582 aaPredicted RBP15.85■□□□□ 0.13
CD48-201ENST00000368045 HPS3Q969F9 1004 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 EEF2KMTQ96G04 330 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 CEP63Q96MT8 703 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 ALS2CR12Q96Q35 445 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 NT5C3AQ9H0P0 336 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 DEF6Q9H4E7 631 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 JMJD4Q9H9V9 463 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 SUGCTQ9HAC7 445 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 ARHGAP20Q9P2F6 1191 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 POLLQ9UGP5 575 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 TFR2Q9UP52 801 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 LRRIQ3A6PVS8 624 aaPredicted RBP15.85■□□□□ 0.13
CD48-201ENST00000368045 SRGAP2O75044 1071 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 GNA14O95837 355 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 SERPINB2P05120 415 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 AKR1B1P15121 316 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 TCP1P17987 556 aaKnown RBP15.85■□□□□ 0.13
CD48-201ENST00000368045 EIF4A3P38919 411 aaKnown RBP15.85■□□□□ 0.13
CD48-201ENST00000368045 TNNI2P48788 182 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 LMAN1P49257 510 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 CYP27A1Q02318 531 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 PDXDC1Q6P996 788 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
CD48-201ENST00000368045 DYMQ7RTS9 669 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 BAP1Q92560 729 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 CCDC102AQ96A19 550 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 COA1Q9GZY4 146 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 MMRN2Q9H8L6 949 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 JADE2Q9NQC1 790 aa15.85■□□□□ 0.13
CD48-201ENST00000368045 BMP2KQ9NSY1 1161 aaPredicted RBP15.85■□□□□ 0.13
CD48-201ENST00000368045 DDX25Q9UHL0 483 aaKnown RBP15.85■□□□□ 0.13
CD48-201ENST00000368045 MACROD2A1Z1Q3 448 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 POTEMA6NI47 508 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 RPS6KA5O75582 802 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 FKBP3Q00688 224 aaKnown RBP15.84■□□□□ 0.13
CD48-201ENST00000368045 ZSCAN26Q16670 478 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 ZCWPW2Q504Y3 356 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 ADGRF4Q8IZF3 695 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 LRRC47Q8N1G4 583 aaKnown RBP15.84■□□□□ 0.13
CD48-201ENST00000368045 COG1Q8WTW3 980 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 DNAJC19Q96DA6 116 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 MTMR8Q96EF0 704 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 CAPZA3Q96KX2 299 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 FAM207AQ9NSI2 230 aaPredicted RBP15.84■□□□□ 0.13
CD48-201ENST00000368045 FAN1Q9Y2M0 1017 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 HYOU1Q9Y4L1 999 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 COL4A3BPQ9Y5P4 624 aa15.84■□□□□ 0.13
CD48-201ENST00000368045 FOCADQ5VW36 1801 aa15.83■□□□□ 0.13
CD48-201ENST00000368045 KLRG2A4D1S0 409 aaPredicted RBP15.83■□□□□ 0.12
CD48-201ENST00000368045 AKR1B10O60218 316 aa15.83■□□□□ 0.12
CD48-201ENST00000368045 GYS1P13807 737 aa15.83■□□□□ 0.12
CD48-201ENST00000368045 ACTN2P35609 894 aa15.83■□□□□ 0.12
CD48-201ENST00000368045 COASYQ13057 564 aa15.83■□□□□ 0.12
CD48-201ENST00000368045 CCNI2Q6ZMN8 369 aaPredicted RBP15.83■□□□□ 0.12
CD48-201ENST00000368045 RRAGAQ7L523 313 aa15.83■□□□□ 0.12
CD48-201ENST00000368045 RNF10Q8N5U6 811 aaKnown RBP15.83■□□□□ 0.12
CD48-201ENST00000368045 GPCPD1Q9NPB8 672 aa15.83■□□□□ 0.12
CD48-201ENST00000368045 SERPINB13Q9UIV8 391 aa15.83■□□□□ 0.12
CD48-201ENST00000368045 TSKSQ9UJT2 592 aa15.83■□□□□ 0.12
CD48-201ENST00000368045 DUSP10Q9Y6W6 482 aa15.83■□□□□ 0.12
CD48-201ENST00000368045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.82■□□□□ 0.12
CD48-201ENST00000368045 LRRC53A6NM62 1247 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 C6orf229H3BNL8 230 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 RBAK-RBAKDNI3L0D1 243 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 ZBTB5O15062 677 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 EPHB6O15197 1021 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 MARSP56192 900 aaKnown RBP15.82■□□□□ 0.12
CD48-201ENST00000368045 ASTE1Q2TB18 679 aaPredicted RBP15.82■□□□□ 0.12
CD48-201ENST00000368045 FAM26FQ5R3K3 315 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 LEKR1Q6ZMV7 388 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms