RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 KIF17Q9P2E2 1029 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SLC4A7Q9Y6M7 1214 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 RNMTO43148 476 aaKnown RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 MTTPP55157 894 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 GSTO1P78417 241 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PRDM15P57071 1507 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 H7C1D1 291 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF701M0R085 212 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 IGF2BP3O00425 579 aaKnown RBP eCLIP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SLC22A2O15244 555 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ABCB4P21439 1286 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CCND1P24385 295 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 IARSP41252 1262 aaKnown RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CSNK2BP67870 215 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 KRT24Q2M2I5 525 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CXorf38Q8TB03 319 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ENKURQ8TC29 256 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 DIS3LQ8TF46 1054 aaKnown RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 DPF3Q92784 378 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SLITRK6Q9H5Y7 841 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 NSMCE4AQ9NXX6 385 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 LRCH1Q9Y2L9 728 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 DEAF1O75398 565 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 TRIM16O95361 564 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 GNG11P61952 73 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 HPS1Q92902 700 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 DSCC1Q9BVC3 393 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ZMYND8Q9ULU4 1186 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SAR1BQ9Y6B6 198 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SNTNA6NMZ2 147 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 STXBP3O00186 592 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 C7P10643 843 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 DNM2P50570 870 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 GK3PQ14409 553 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ZFP1Q6P2D0 407 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 COLGALT2Q8IYK4 626 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC197Q8NCU1 140 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 RIC8AQ9NPQ8 531 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 RBM47A0AV96 593 aaKnown RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 MATN2O00339 956 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 IL18RAPO95256 599 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SLC4A2P04920 1241 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 GCKP35557 465 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 FAM172AQ8WUF8 416 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF219Q9P2Y4 722 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ZMYM6O95789 1325 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SAC3D1A6NKF1 404 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 KRT7P08729 469 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 VDRP11473 427 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PSMA3P25788 255 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 KYAT1Q16773 422 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 INTS8Q75QN2 995 aaKnown RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 EFL1Q7Z2Z2 1120 aaKnown RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PPP4R1Q8TF05 950 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CCT7Q99832 543 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PDRG1Q9NUG6 133 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PTPRKQ15262 1439 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 TEFQ10587 303 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CAPS2Q9BXY5 557 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PNMA8CA0A1B0GUJ8 204 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 DLG4P78352 724 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PALM2Q8IXS6 379 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 KDM3AQ9Y4C1 1321 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 DNAJB1P25685 340 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 IFT88Q13099 833 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 WTAPQ15007 396 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 TMTC3Q6ZXV5 915 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 HS2ST1Q7LGA3 356 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 EHD3Q9NZN3 535 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 TSHRP16473 764 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 LMOD1P29536 600 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CATIPQ7Z7H3 387 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 KRI1Q8N9T8 703 aaKnown RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PDPRQ8NCN5 879 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ADCY3O60266 1144 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PYGMP11217 842 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF75DP51815 510 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 UBE2J2Q8N2K1 259 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SAMD3Q8N6K7 520 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 TIPINQ9BVW5 301 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 MAPRE3Q9UPY8 281 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 A0A1W2PQC6 194 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 KLHL18O94889 574 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ACAT1P24752 427 aaKnown RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 MAPRE2Q15555 327 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF135P52742 658 aaPredicted RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 DEFA1P59665 94 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 DEFA3P59666 94 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC153Q494R4 210 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 LEMD2Q8NC56 503 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 EHD1Q9H4M9 534 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 GRPEL2Q8TAA5 225 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ITIH6Q6UXX5 1313 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 RAP1GDS1P52306 607 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 C8orf76Q96K31 380 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 IFNKQ9P0W0 207 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 STAP2Q9UGK3 403 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 PPME1Q9Y570 386 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CUL4AQ13619 759 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ENOX1Q8TC92 643 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms