RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 KCNJ6P48051 423 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 FAM98CQ17RN3 349 aaKnown RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 FMR1NBQ8N0W7 255 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 DHX36Q9H2U1 1008 aaKnown RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 PIH1D3Q9NQM4 214 aaKnown RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 TRPC6Q9Y210 931 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 PRAMEF22A3QJZ6 481 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 SPDYE2BA6NHP3 402 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 SPDYE6P0CI01 402 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 STX2P32856 288 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 CYP2J2P51589 502 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 SARNPP82979 210 aaKnown RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 MB21D2Q8IYB1 491 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 DEPTORQ8TB45 409 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 WHAMMQ8TF30 809 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 GLG1Q92896 1179 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 TMEM206Q9H813 350 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 KLHL14Q9P2G3 628 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 ITM2BQ9Y287 266 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 ZBTB1Q9Y2K1 713 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 BUB1O43683 1085 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 NDUFA10O95299 355 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 KRT15P19012 456 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 MYL7Q01449 175 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 UAP1Q16222 522 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 DDX17Q92841 729 aaKnown RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 MCUR1Q96AQ8 359 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 HAUS1Q96CS2 278 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 ASAP1Q9ULH1 1129 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 PCDHA1Q9Y5I3 950 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 PPP1R18Q6NYC8 613 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 MB21D1Q8N884 522 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 CNOT10Q9H9A5 744 aaKnown RBP9.82□□□□□ -0.84
SYNE1-205ENST00000367251 LRFN2Q9ULH4 789 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 KRT19P08727 400 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 ATP6V1E1P36543 226 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 GUCY2FP51841 1108 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-205ENST00000367251 KIF2CQ99661 725 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 LRRIQ1Q96JM4 1722 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 ERCC6L2Q5T890 1561 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 ANO9A1A5B4 782 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 DDX39AO00148 427 aaKnown RBP9.82□□□□□ -0.84
SYNE1-205ENST00000367251 TNNI1P19237 187 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 POLR2BP30876 1174 aaKnown RBP9.82□□□□□ -0.84
SYNE1-205ENST00000367251 SH3BGRP55822 239 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-205ENST00000367251 IRX4P78413 519 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 PABPC4Q13310 644 aaKnown RBP eCLIP9.82□□□□□ -0.84
SYNE1-205ENST00000367251 PHLDB2Q86SQ0 1253 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 VPS52Q8N1B4 723 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 ATP2A3Q93084 1043 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 KANSL2Q9H9L4 492 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 NHEJ1Q9H9Q4 299 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-205ENST00000367251 KIAA1024Q9UPX6 916 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 NRXN1Q9ULB1 1477 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 RAD51AP2Q09MP3 1159 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 IFRD2Q12894 506 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-205ENST00000367251 DMP1Q13316 513 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-205ENST00000367251 DIXDC1Q155Q3 683 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 TMTC3Q6ZXV5 915 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 PGBD1Q96JS3 809 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 VCXQ9H320 206 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 DISC1Q9NRI5 854 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 PCDHB6Q9Y5E3 794 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 PTPRMP28827 1452 aa9.82□□□□□ -0.84
SYNE1-205ENST00000367251 PGRMC1O00264 195 aaKnown RBP9.81□□□□□ -0.84
SYNE1-205ENST00000367251 PRPF6O94906 941 aaKnown RBP9.81□□□□□ -0.84
SYNE1-205ENST00000367251 RASSF7Q02833 373 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 ABCB5Q2M3G0 1257 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 ZBTB8OSQ8IWT0 167 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 EFCAB13Q8IY85 973 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 LRRC47Q8N1G4 583 aaKnown RBP9.81□□□□□ -0.84
SYNE1-205ENST00000367251 PROM2Q8N271 834 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 CCHCR1Q8TD31 782 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 BCAS4Q8TDM0 211 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 RUBCNQ92622 972 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 GOLGA8HP0CJ92 632 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 DCAF15Q66K64 600 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 KIAA1841Q6NSI8 718 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 EXOC8Q8IYI6 725 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 ACCSQ96QU6 501 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 ZDHHC9Q9Y397 364 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 TBC1D8O95759 1140 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 NR2F2P24468 414 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 LIG4P49917 911 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 PPP2R5AQ15172 486 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 FAM102BQ5T8I3 360 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 MAP3K21Q5TCX8 1036 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 ARHGEF16Q5VV41 709 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 ARMCX5Q6P1M9 558 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 TBCKQ8TEA7 893 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 SKA2Q8WVK7 121 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-205ENST00000367251 CNKSR1Q969H4 720 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 NACC1Q96RE7 527 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 MXD3Q9BW11 206 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 PARD6BQ9BYG5 372 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 VCX3BQ9H321 246 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 VPS37BQ9H9H4 285 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 SAMSN1Q9NSI8 373 aaKnown RBP9.81□□□□□ -0.84
SYNE1-205ENST00000367251 USTQ9Y2C2 406 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms