RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 MAN1B1Q9UKM7 699 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 GOLGA4Q13439 2230 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 NDUFA10O95299 355 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 NR1H3Q13133 447 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 PALM2Q8IXS6 379 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 CLNS1AP54105 237 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 RNASE9P60153 205 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 SP4Q02446 784 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 RHOT2Q8IXI1 618 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 VPS37BQ9H9H4 285 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 HARSP12081 509 aaKnown RBP13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PROSER3Q2NL68 480 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PKD2L1Q9P0L9 805 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PDE11AQ9HCR9 933 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PALLDQ8WX93 1383 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 KRT81Q14533 505 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 H7C1W4 665 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 HESX1Q9UBX0 185 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 SYNGAP1Q96PV0 1343 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 GTF2IP78347 998 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 RNF34Q969K3 372 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PARVGQ9HBI0 331 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 SLC39A2Q9NP94 309 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 ADD3Q9UEY8 706 aaKnown RBP13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 IPO11Q9UI26 975 aaKnown RBP13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PTPRUQ92729 1446 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 DIP2AQ14689 1571 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PPIP5K2O43314 1243 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 ARHGEF18Q6ZSZ5 1173 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PDLIM2Q96JY6 352 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PSMB7Q99436 277 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 GCNT4Q9P109 453 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 ARHGEF37A1IGU5 675 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 ANXA13P27216 316 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 CSADQ9Y600 493 aa13.1□□□□□ -0.31
CDC42BPA-203ENST00000366766 GUCY2DQ02846 1103 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 C11orf57Q6ZUT1 292 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 CCDC197Q8NCU1 140 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 SPC25Q9HBM1 224 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 ARMCX5Q6P1M9 558 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 TRIM50Q86XT4 487 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 GPKOWQ92917 476 aaPredicted RBP eCLIP13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 MAP2K2P36507 400 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 ARHGAP44Q17R89 818 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.09□□□□□ -0.312e-6■■■■■ 54.4
CDC42BPA-203ENST00000366766 STAT2P52630 851 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 CCDC13Q8IYE1 715 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 CLIC6Q96NY7 704 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 ACCSQ96QU6 501 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 RIOK1Q9BRS2 568 aaKnown RBP13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 NRBP2Q9NSY0 501 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 MIF4GDA9UHW6 222 aaKnown RBP13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 hCG_1642624A0A1W2PR95 340 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 IPO5O00410 1097 aaKnown RBP13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 GLG1Q92896 1179 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 FOXP2O15409 715 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 PTPREP23469 700 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 EHHADHQ08426 723 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 RASA3Q14644 834 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 CASC4Q6P4E1 433 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 ANKRD35Q8N283 1001 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 STAMQ92783 540 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 TXLNGQ9NUQ3 528 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 ARHGEF28Q8N1W1 1705 aaKnown RBP13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 ABCB4P21439 1286 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 SGMS1Q86VZ5 419 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 POMGNT1Q8WZA1 660 aa13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 ACTR5Q9H9F9 607 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPA-203ENST00000366766 CUL4BQ13620 913 aa13.08□□□□□ -0.31
CDC42BPA-203ENST00000366766 XKR9Q5GH70 373 aa13.08□□□□□ -0.31
CDC42BPA-203ENST00000366766 TCP11X2Q5H9J9 407 aa13.08□□□□□ -0.31
CDC42BPA-203ENST00000366766 SLC35F6Q8N357 371 aa13.08□□□□□ -0.31
CDC42BPA-203ENST00000366766 RAD51AP2Q09MP3 1159 aa13.08□□□□□ -0.31
CDC42BPA-203ENST00000366766 ASPHQ12797 758 aa13.08□□□□□ -0.31
CDC42BPA-203ENST00000366766 PODXLO00592 558 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 HNRNPDLO14979 420 aaKnown RBP13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 MFAP3LO75121 409 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 ZNF827Q17R98 1081 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 MUM1L1Q5H9M0 696 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 FAM102BQ5T8I3 360 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 SLC7A3Q8WY07 619 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 GUCY2FP51841 1108 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 FAM186BQ8IYM0 893 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 MED7O43513 233 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 GARSP41250 739 aaKnown RBP13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 POLGP54098 1239 aaPredicted RBP13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 CAV1Q03135 178 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 CPXCR1Q8N123 301 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 THEGQ9P2T0 379 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 PYCARDQ9ULZ3 195 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 PPM1KQ8N3J5 372 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 TMEM191BP0C7N4 346 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms