RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 DIS3Q9Y2L1 958 aaKnown RBP18.12■□□□□ 0.49
NID1-202ENST00000366595 SEC31AO94979 1220 aaKnown RBP18.11■□□□□ 0.49
NID1-202ENST00000366595 ARL4AP40617 200 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 TECP42680 631 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 CPXCR1Q8N123 301 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 MTMR6Q9Y217 621 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 KIF1CO43896 1103 aaKnown RBP18.11■□□□□ 0.49
NID1-202ENST00000366595 PDE6AP16499 860 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 NCF2P19878 526 aaPredicted RBP18.11■□□□□ 0.49
NID1-202ENST00000366595 PPARGP37231 505 aaPredicted RBP18.11■□□□□ 0.49
NID1-202ENST00000366595 IFRD2Q12894 506 aaPredicted RBP18.11■□□□□ 0.49
NID1-202ENST00000366595 AK8Q96MA6 479 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 TRIM55Q9BYV6 548 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 SPDYE2BA6NHP3 402 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 APOA1P02647 267 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 KRT8P05787 483 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 SPDYE6P0CI01 402 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 TAC1P20366 129 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 MAN2A1Q16706 1144 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 DNAAF3Q8N9W5 541 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 DTNBP1Q96EV8 351 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 FMO2Q99518 471 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 NOVA2Q9UNW9 492 aaKnown RBP18.11■□□□□ 0.49
NID1-202ENST00000366595 TLR3O15455 904 aaKnown RBP18.11■□□□□ 0.49
NID1-202ENST00000366595 EFCAB14O75071 495 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 PPP6R2O75170 966 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 KRT39Q6A163 491 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 ZC3H18Q86VM9 953 aaKnown RBP18.11■□□□□ 0.49
NID1-202ENST00000366595 ACSBG1Q96GR2 724 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 ANO3Q9BYT9 981 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 ZMYND12Q9H0C1 365 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 NRBP2Q9NSY0 501 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 PCDHA7Q9UN72 937 aa18.11■□□□□ 0.49
NID1-202ENST00000366595 ATP2B4P23634 1241 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 PSMC2P35998 433 aaKnown RBP18.1■□□□□ 0.49
NID1-202ENST00000366595 TFDP1Q14186 410 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 ING2Q9H160 280 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 POLR2MP0CAP2 368 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 SCG2P13521 617 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 SPARCL1Q14515 664 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 TTLL7Q6ZT98 887 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 CENPUQ71F23 418 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 ZSCAN10Q96SZ4 725 aaPredicted RBP18.1■□□□□ 0.49
NID1-202ENST00000366595 CCDC188H7C350 402 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 CFLARO15519 480 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 AFPP02771 609 aaKnown RBP18.1■□□□□ 0.49
NID1-202ENST00000366595 OCRLQ01968 901 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 TSTA3Q13630 321 aaPredicted RBP18.1■□□□□ 0.49
NID1-202ENST00000366595 TRIM67Q6ZTA4 783 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 MLXIPQ9HAP2 919 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 SERPINI2O75830 405 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 CA4P22748 312 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 TMOD1P28289 359 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 GRM1Q13255 1194 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 SPOUT1Q5T280 376 aaKnown RBP18.1■□□□□ 0.49
NID1-202ENST00000366595 VPS39Q96JC1 886 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 AS3MTQ9HBK9 375 aa18.1■□□□□ 0.49
NID1-202ENST00000366595 CHCHD3Q9NX63 227 aaKnown RBP18.1■□□□□ 0.49
NID1-202ENST00000366595 TMEM232C9JQI7 657 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 KRT37O76014 449 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 DLATP10515 647 aaKnown RBP18.09■□□□□ 0.49
NID1-202ENST00000366595 FANCBQ8NB91 859 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 MTBPQ96DY7 904 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 CALR3Q96L12 384 aaKnown RBP18.09■□□□□ 0.49
NID1-202ENST00000366595 ARHGAP26Q9UNA1 814 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 MED7O43513 233 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 KRT1P04264 644 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 PDIK1LQ8N165 341 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 DDX25Q9UHL0 483 aaKnown RBP18.09■□□□□ 0.49
NID1-202ENST00000366595 SLC12A6Q9UHW9 1150 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 JAG2Q9Y219 1238 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 CD109Q6YHK3 1445 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 CASP8Q14790 479 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 H3BRJ5 948 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 GYG2O15488 501 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 TRAPPC3LQ5T215 181 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 BZW1Q7L1Q6 419 aaKnown RBP18.09■□□□□ 0.49
NID1-202ENST00000366595 TRIM59Q8IWR1 403 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 ANKRD13CQ8N6S4 541 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 OTUD7AQ8TE49 926 aaPredicted RBP18.09■□□□□ 0.49
NID1-202ENST00000366595 SLC39A2Q9NP94 309 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 PYCARDQ9ULZ3 195 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 ANO5Q75V66 913 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 FBXO18Q8NFZ0 1043 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 PARD6BQ9BYG5 372 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 PCDHB4Q9Y5E5 795 aa18.09■□□□□ 0.49
NID1-202ENST00000366595 TBC1D1Q86TI0 1168 aaPredicted RBP18.08■□□□□ 0.49
NID1-202ENST00000366595 ENOX1Q8TC92 643 aaKnown RBP18.08■□□□□ 0.49
NID1-202ENST00000366595 CDK13Q14004 1512 aaKnown RBP18.08■□□□□ 0.49
NID1-202ENST00000366595 MAP3K10Q02779 954 aa18.08■□□□□ 0.48
NID1-202ENST00000366595 ARHGEF16Q5VV41 709 aa18.08■□□□□ 0.48
NID1-202ENST00000366595 FAM160B1Q5W0V3 765 aa18.08■□□□□ 0.48
NID1-202ENST00000366595 STAMBPL1Q96FJ0 436 aa18.08■□□□□ 0.48
NID1-202ENST00000366595 FAM89AQ96GI7 184 aa18.08■□□□□ 0.48
NID1-202ENST00000366595 DACH2Q96NX9 599 aa18.08■□□□□ 0.48
NID1-202ENST00000366595 NDE1Q9NXR1 346 aa18.08■□□□□ 0.48
NID1-202ENST00000366595 LCMT1Q9UIC8 334 aa18.08■□□□□ 0.48
NID1-202ENST00000366595 RGS12O14924 1447 aa18.08■□□□□ 0.48
NID1-202ENST00000366595 TAF1BQ53T94 588 aaPredicted RBP18.08■□□□□ 0.48
NID1-202ENST00000366595 EXOC8Q8IYI6 725 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms