RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 POLR3EQ9NVU0 708 aa11.97□□□□□ -0.49
YBX3-203ENST00000366286 BRPF3Q9ULD4 1205 aa11.97□□□□□ -0.49
YBX3-203ENST00000366286 SNX14Q9Y5W7 946 aa11.97□□□□□ -0.49
YBX3-203ENST00000366286 TRIP12Q14669 1992 aaPredicted RBP11.96□□□□□ -0.49
YBX3-203ENST00000366286 KLF18A0A0U1RQI7 1052 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 hCG_1642624A0A1W2PR95 340 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 A6NJR5 290 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 ZBTB43O43298 467 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 RGS20O76081 388 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 GH1P01241 217 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 CD4P01730 458 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 HMGB1P09429 215 aaKnown RBP11.96□□□□□ -0.49
YBX3-203ENST00000366286 CCND2P30279 289 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 ARHGAP1Q07960 439 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 RTN1Q16799 776 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 LRIT3Q3SXY7 679 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 BRDTQ58F21 947 aaPredicted RBP11.96□□□□□ -0.49
YBX3-203ENST00000366286 C9orf50Q5SZB4 431 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 CCDC82Q8N4S0 544 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 MTG1Q9BT17 334 aaPredicted RBP11.96□□□□□ -0.49
YBX3-203ENST00000366286 RBM28Q9NW13 759 aaKnown RBP11.96□□□□□ -0.49
YBX3-203ENST00000366286 MRVI1Q9Y6F6 885 aa11.96□□□□□ -0.49
YBX3-203ENST00000366286 SZT2Q5T011 3432 aa11.96□□□□□ -0.5
YBX3-203ENST00000366286 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
YBX3-203ENST00000366286 GOLGA8AA7E2F4 631 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 GOLGA8BA8MQT2 603 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 B4GALT4O60513 344 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 TIMP1P01033 207 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 MMP3P08254 477 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 EPHB4P54760 987 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 FPGSQ05932 587 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 USP17L6PQ6QN14 398 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 BLOC1S2Q6QNY1 142 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 VSIG10LQ86VR7 867 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 SMARCC2Q8TAQ2 1214 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 AFG1LQ8WV93 481 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
YBX3-203ENST00000366286 CUL5Q93034 780 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 ZFP91Q96JP5 570 aaPredicted RBP11.95□□□□□ -0.5
YBX3-203ENST00000366286 SEZ6LQ9BYH1 1024 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 PPP1R12CQ9BZL4 782 aa11.95□□□□□ -0.5
YBX3-203ENST00000366286 DDX41Q9UJV9 622 aaKnown RBP11.95□□□□□ -0.5
YBX3-203ENST00000366286 NID2Q14112 1375 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 PIK3CDO00329 1044 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 MEIS2O14770 477 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 KPNA6O60684 536 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 CASTP20810 708 aaKnown RBP11.94□□□□□ -0.5
YBX3-203ENST00000366286 FGD1P98174 961 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 APOBRQ0VD83 1088 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 FUT2Q10981 343 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 SHHQ15465 462 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 Q6ZUG5 572 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 HEATR3Q7Z4Q2 680 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 PPP1R13LQ8WUF5 828 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 BRF1Q92994 677 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 TRPV6Q9H1D0 765 aa11.94□□□□□ -0.5
YBX3-203ENST00000366286 ALDH8A1Q9H2A2 487 aaPredicted RBP11.94□□□□□ -0.5
YBX3-203ENST00000366286 NAP1L2Q9ULW6 460 aaPredicted RBP11.94□□□□□ -0.5
YBX3-203ENST00000366286 UMODL1Q5DID0 1318 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 SORBS3O60504 671 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 UBA1P22314 1058 aaKnown RBP11.93□□□□□ -0.5
YBX3-203ENST00000366286 RPS6KB1P23443 525 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 CDC27P30260 824 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 RCAN1P53805 252 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 MRPS9P82933 396 aaKnown RBP11.93□□□□□ -0.5
YBX3-203ENST00000366286 UBE2SQ16763 222 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 NBPF20Q3BBV1 942 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 WWC2Q6AWC2 1192 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 MFSD5Q6N075 450 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 PPTC7Q8NI37 304 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 EMID1Q96A84 441 aaPredicted RBP11.93□□□□□ -0.5
YBX3-203ENST00000366286 HIPK3Q9H422 1215 aa11.93□□□□□ -0.5
YBX3-203ENST00000366286 FAM217BQ9NTX9 383 aaPredicted RBP11.93□□□□□ -0.5
YBX3-203ENST00000366286 TRMT13Q9NUP7 481 aaKnown RBP11.93□□□□□ -0.5
YBX3-203ENST00000366286 EPB41L2O43491 1005 aaKnown RBP11.92□□□□□ -0.5
YBX3-203ENST00000366286 GGPS1O95749 300 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 ZNF286BP0CG31 522 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 CYP2C18P33260 490 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 METAP2P50579 478 aaKnown RBP eCLIP11.92□□□□□ -0.53e-11■■■□□ 14.6
YBX3-203ENST00000366286 CHMP4BP1P59074 171 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 SP2Q02086 613 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 SEMA3FQ13275 785 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 PPIGQ13427 754 aaKnown RBP eCLIP11.92□□□□□ -0.57e-10■□□□□ 8.5
YBX3-203ENST00000366286 DGKDQ16760 1214 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 FAM47CQ5HY64 1035 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 CELF3Q5SZQ8 465 aaKnown RBP11.92□□□□□ -0.5
YBX3-203ENST00000366286 TYW1BQ6NUM6 668 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 NFRKBQ6P4R8 1299 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 KCNV1Q6PIU1 500 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 DHX37Q8IY37 1157 aaKnown RBP11.92□□□□□ -0.5
YBX3-203ENST00000366286 KAT2BQ92831 832 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 INPP4AQ96PE3 977 aaPredicted RBP11.92□□□□□ -0.5
YBX3-203ENST00000366286 NOC4LQ9BVI4 516 aaKnown RBP11.92□□□□□ -0.5
YBX3-203ENST00000366286 PSTPIP2Q9H939 334 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 PTPRSQ13332 1948 aa11.92□□□□□ -0.5
YBX3-203ENST00000366286 KAT6AQ92794 2004 aa11.91□□□□□ -0.5
YBX3-203ENST00000366286 STXBP3O00186 592 aa11.91□□□□□ -0.5
YBX3-203ENST00000366286 STAM2O75886 525 aa11.91□□□□□ -0.5
YBX3-203ENST00000366286 CYP2C9P11712 490 aa11.91□□□□□ -0.5
YBX3-203ENST00000366286 CSF2RAP15509 400 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms