RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IL23AQ9NPF7 189 aa15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 TRMT13Q9NUP7 481 aaKnown RBP15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 UNC80Q8N2C7 3258 aa15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 GH1P01241 217 aa15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 MMP3P08254 477 aa15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 PTPN11Q06124 597 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 PGM5Q15124 567 aa15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 ZNF697Q5TEC3 545 aa15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 ZNF365Q70YC5 407 aa15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 TMTC2Q8N394 836 aa15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 AFG1LQ8WV93 481 aa15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 MYL10Q9BUA6 226 aa15.85■□□□□ 0.13
TNFRSF1A-202ENST00000366159 FRMPD4Q14CM0 1322 aa15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 TMEM265A0A087WTH1 108 aa15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 SUPT20HL2P0C7V6 817 aa15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 ACRP10323 421 aa15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 TSGA10IPQ3SY00 556 aa15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 PSRC1Q6PGN9 363 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 CASC1Q6TDU7 716 aa15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 SRBD1Q8N5C6 995 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 IL31RAQ8NI17 732 aa15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 HERVK_113Q902F9 699 aa15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 KAT2BQ92831 832 aa15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 ANO2Q9NQ90 1003 aa15.84■□□□□ 0.13
TNFRSF1A-202ENST00000366159 GCOM1H8Y6P7 765 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 POLR2MP0CAP2 368 aa15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CYP2C9P11712 490 aa15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 HOXD8P13378 290 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 KIF5BP33176 963 aa15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CCL23P55773 120 aa15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 SESTD1Q86VW0 696 aa15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 SGMS1Q86VZ5 419 aa15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 FAM161BQ96MY7 647 aa15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CTAGE1Q96RT6 745 aa15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 LZTS2Q9BRK4 669 aa15.83■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PLEKHA8P1O95397 391 aa15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 TGFB3P10600 412 aa15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 EXOSC10Q01780 885 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 SP2Q02086 613 aa15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 LAMC2Q13753 1193 aa15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 MYSM1Q5VVJ2 828 aa15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 KCNV1Q6PIU1 500 aa15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PPTC7Q8NI37 304 aa15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CTCFLQ8NI51 663 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PPP1R13LQ8WUF5 828 aa15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CDX2Q99626 313 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CXXC1Q9P0U4 656 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 MRVI1Q9Y6F6 885 aa15.82■□□□□ 0.12
TNFRSF1A-202ENST00000366159 HAS3O00219 553 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PIK3CDO00329 1044 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 MEIS2O14770 477 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 FGBP02675 491 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CALM1P0DP23 149 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CALM2P0DP24 149 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CALM3P0DP25 149 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 MYCLP12524 364 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CASTP20810 708 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 DNAJB2P25686 324 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 GNAQP50148 359 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 MRPS9P82933 396 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 DGKDQ16760 1214 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 RASEFQ8IZ41 740 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 GPKOWQ92917 476 aaPredicted RBP eCLIP15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 SCLYQ96I15 445 aa15.81■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PRUNE2Q8WUY3 3088 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CHD7Q9P2D1 2997 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CCDC69A6NI79 296 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 GRXCR1A8MXD5 290 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 F2P00734 622 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 RXRAP19793 462 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 ICAM3P32942 547 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 HSDL1Q3SXM5 330 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CELF3Q5SZQ8 465 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 FCHSD1Q86WN1 690 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 DHX37Q8IY37 1157 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CMTR1Q8N1G2 835 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 FANCBQ8NB91 859 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 RRP36Q96EU6 259 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 LRRC2Q9BYS8 371 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PBX4Q9BYU1 374 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 MYH7BA7E2Y1 1941 aa15.8■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PPFIA4O75335 1185 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CDC45O75419 566 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 UBA1P22314 1058 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 CCND2P30279 289 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 SEMA3FQ13275 785 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 ADCK5Q3MIX3 580 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 FAM47CQ5HY64 1035 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 GDF6Q6KF10 455 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 USP17L6PQ6QN14 398 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 NFXL1Q6ZNB6 911 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 TMTC3Q6ZXV5 915 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 RPUSD2Q8IZ73 545 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 SLC17A8Q8NDX2 589 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PIBF1Q8WXW3 757 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms