RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 MLECQ14165 292 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 KRT81Q14533 505 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 PTPAQ15257 358 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 NBPF9Q3BBW0 867 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 LY6G5CQ5SRR4 150 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 NBPF12Q5TAG4 269 aaPredicted RBP0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 SP5Q6BEB4 398 aaPredicted RBP0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 CRTC3Q6UUV7 619 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 NXPE4Q6UWF7 544 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 Q6ZSN1 163 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 SV2BQ7L1I2 683 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 C1QL2Q7Z5L3 287 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 STK32CQ86UX6 486 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 PROSER2Q86WR7 435 aaPredicted RBP0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 REXO1L1PQ8IX06 675 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 FAM126BQ8IXS8 530 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 FNBP4Q8N3X1 1017 aaPredicted RBP0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 ZNF808Q8N4W9 903 aaPredicted RBP0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 SMRP1Q8NCR6 262 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 TMEM52Q8NDY8 209 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 TMC1Q8TDI8 760 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 FRS2Q8WU20 508 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 ZCCHC14Q8WYQ9 949 aaKnown RBP0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 HAS1Q92839 578 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 FAM129BQ96TA1 746 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 DSCC1Q9BVC3 393 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 C1QTNF7Q9BXJ2 289 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 MIR1-1HGQ9H1L0 117 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 TOR3AQ9H497 397 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 RSAD1Q9HA92 442 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 TLR9Q9NR96 1032 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 KLHL3Q9UH77 587 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 CROTQ9UKG9 612 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 OAZ3Q9UMX2 235 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 INSL6Q9Y581 213 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 PCDHB12Q9Y5F1 795 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 KRTAP23-1A1A580 65 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 DNAJC9-AS1A6NH13 148 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 CAPN14A8MX76 684 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 TRAF5O00463 557 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 FGF10O15520 208 aaPredicted RBP0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 B3GALT2O43825 422 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 CDC14BO60729 498 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 CHGBP05060 677 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 TKTP29401 623 aaKnown RBP0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 NOP2P46087 812 aaKnown RBP0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 TAP1Q03518 808 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 ADAM9Q13443 819 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 USP10Q14694 798 aaKnown RBP0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 RTP2Q5QGT7 225 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 HECTD2Q5U5R9 776 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 RUSC1-AS1Q66K80 236 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 FBXO42Q6P3S6 717 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 OLFML1Q6UWY5 402 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 Q6ZUG5 572 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 SGMS1Q86VZ5 419 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 SRRM1Q8IYB3 904 aaKnown RBP0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 RETREG2Q8NC44 543 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 ANKS1AQ92625 1134 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 DMRTB1Q96MA1 342 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 ZSWIM3Q96MP5 696 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 PTCHD1Q96NR3 888 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 KIF2CQ99661 725 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 R3HDMLQ9H3Y0 253 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 TESQ9UGI8 421 aaKnown RBP0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 ZNF580Q9UK33 172 aa0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 AHNAKQ09666 5890 aaKnown RBP0.91□□□□□ -2.26
RNU6-54P-201ENST00000365563 H3BNC9 293 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 GIPC1O14908 333 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 RGS13O14921 159 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 CLEC3AO75596 197 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 RPS6KA4O75676 772 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 ABHD16AO95870 558 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 ABL1P00519 1130 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 RAG1P15918 1043 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 MT3P25713 68 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZFP36P26651 326 aaKnown RBP0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 MSX2P35548 267 aaPredicted RBP0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 CTSKP43235 329 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 ABCG1P45844 678 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 MLLT6P55198 1093 aaPredicted RBP0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 FOXF2Q12947 444 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 SNW1Q13573 536 aaKnown RBP0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 LARP7Q4G0J3 582 aaKnown RBP eCLIP0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 PI16Q6UXB8 463 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 MRGPREQ86SM8 312 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 ADGRE4PQ86SQ3 457 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 FAM26EQ8N5C1 309 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 SEC14L1Q92503 715 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 LENG9Q96B70 501 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 ALKBH8Q96BT7 664 aaKnown RBP0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 AJUBAQ96IF1 538 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 SLC12A9Q9BXP2 914 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 SRRTQ9BXP5 876 aaKnown RBP0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 NIF3L1Q9GZT8 377 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 MKRN2Q9H000 416 aaKnown RBP0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 CYP4F11Q9HBI6 524 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 GFOD1Q9NXC2 390 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 GPRC5BQ9NZH0 403 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 FBLN5Q9UBX5 448 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms