RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 FGD4Q96M96 766 aa3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 RBM15Q96T37 977 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 KRTAP17-1Q9BYP8 105 aa3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 L2HGDHQ9H9P8 463 aa3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 CYP26B1Q9NR63 512 aa3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 SPATA6Q9NWH7 488 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 MARCH2Q9P0N8 246 aa3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 EFR3BQ9Y2G0 817 aa3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 EMC9Q9Y3B6 208 aa3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 NUB1Q9Y5A7 615 aa3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 TIMM13Q9Y5L4 95 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 LTBP3Q9NS15 1303 aa3.1□□□□□ -1.91
RNU6-1048P-201ENST00000364054 A0A1W2PQH9 124 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 ZBTB7CA1YPR0 619 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 NPEPPSL1A6NEC2 478 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 C22orf46C9J442 243 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 KCNH1O95259 989 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 CPP00450 1065 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 C8BP07358 591 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 VAMP1P23763 118 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 CASP7P55210 303 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 PAK2Q13177 524 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 TBC1D10BQ4KMP7 808 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 HS1BP3Q53T59 392 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 TMCO4Q5TGY1 634 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 KIAA1211LQ6NV74 962 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 SH3RF3Q8TEJ3 882 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 COPS5Q92905 334 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 PPP1R14AQ96A00 147 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 TRMT2BQ96GJ1 504 aaKnown RBP3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 NOX5Q96PH1 765 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 TMEM209Q96SK2 561 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 GORASP1Q9BQQ3 440 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 TMEM168Q9H0V1 697 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 BARX1Q9HBU1 254 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 JADE2Q9NQC1 790 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 GINM1Q9NU53 330 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 CLEC1BQ9P126 229 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 FTSJ1Q9UET6 329 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 INVSQ9Y283 1065 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 TSC22D4Q9Y3Q8 395 aa3.09□□□□□ -1.91
RNU6-1048P-201ENST00000364054 CYR61O00622 381 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 HGSO14964 777 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 FZD7O75084 574 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 THBDP07204 575 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 PLS3P13797 630 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 TACR2P21452 398 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 HOXC12P31275 282 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 ITGA1P56199 1179 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 SCRN1Q12765 414 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 MCTP2Q6DN12 878 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 CCDC81Q6ZN84 652 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 ARHGEF18Q6ZSZ5 1173 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 CIR1Q86X95 450 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 TRIM48Q8IWZ4 208 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 TXNDC5Q8NBS9 432 aaKnown RBP3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 PHOSPHO1Q8TCT1 267 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 PLEKHO2Q8TD55 490 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 DIO2Q92813 273 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 TOE1Q96GM8 510 aaKnown RBP3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 TMEM169Q96HH4 297 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 DEF6Q9H4E7 631 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 BTG4Q9NY30 223 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 LRP2BPQ9P2M1 347 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 ST6GALNAC2Q9UJ37 374 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 ZNF652Q9Y2D9 606 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 TCAF1Q9Y4C2 921 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 PCDHGB7Q9Y5F8 929 aa3.08□□□□□ -1.92
RNU6-1048P-201ENST00000364054 H7BY64 318 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 AGRPO00253 132 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 KRIT1O00522 736 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 DDX3XO00571 662 aaKnown RBP eCLIP3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 MEFVO15553 781 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 DGKIO75912 1065 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 CHGBP05060 677 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 TNNI3KQ59H18 835 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 GTF2IRD2BQ6EKJ0 949 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 CYP4F22Q6NT55 531 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 CEP68Q76N32 757 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 GTF2IRD2Q86UP8 949 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 VPS37DQ86XT2 251 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 TRIM59Q8IWR1 403 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 ZFPM1Q8IX07 1006 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 SORCS2Q96PQ0 1159 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 MCMBPQ9BTE3 642 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 MRIQ9BWK5 157 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 NKX2-4Q9H2Z4 354 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 PCDHB10Q9UN67 800 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 X6R8D5 127 aa3.07□□□□□ -1.92
RNU6-1048P-201ENST00000364054 OVOL3O00110 214 aa3.06□□□□□ -1.92
RNU6-1048P-201ENST00000364054 SGSM2O43147 1006 aa3.06□□□□□ -1.92
RNU6-1048P-201ENST00000364054 PPP1R11O60927 126 aaPredicted RBP3.06□□□□□ -1.92
RNU6-1048P-201ENST00000364054 GJA8P48165 433 aa3.06□□□□□ -1.92
RNU6-1048P-201ENST00000364054 NASPP49321 788 aaPredicted RBP3.06□□□□□ -1.92
RNU6-1048P-201ENST00000364054 SELENOPP49908 381 aa3.06□□□□□ -1.92
RNU6-1048P-201ENST00000364054 PPP2CBP62714 309 aa3.06□□□□□ -1.92
RNU6-1048P-201ENST00000364054 RACK1P63244 317 aaKnown RBP3.06□□□□□ -1.92
RNU6-1048P-201ENST00000364054 PPP2CAP67775 309 aa3.06□□□□□ -1.92
RNU6-1048P-201ENST00000364054 LSAMPQ13449 338 aa3.06□□□□□ -1.92
RNU6-1048P-201ENST00000364054 ZNF568Q3ZCX4 644 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms