RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 ADKP55263 362 aaKnown RBP10.19□□□□□ -0.78
CALD1-202ENST00000361901 SPP2Q13103 211 aa10.19□□□□□ -0.78
CALD1-202ENST00000361901 GRM1Q13255 1194 aa10.19□□□□□ -0.78
CALD1-202ENST00000361901 RBBP5Q15291 538 aaKnown RBP10.19□□□□□ -0.78
CALD1-202ENST00000361901 TPH2Q8IWU9 490 aa10.19□□□□□ -0.78
CALD1-202ENST00000361901 ERMNQ8TAM6 284 aa10.19□□□□□ -0.78
CALD1-202ENST00000361901 RGS17Q9UGC6 210 aaPredicted RBP10.19□□□□□ -0.78
CALD1-202ENST00000361901 FAM170AA1A519 330 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 SPDYE2BA6NHP3 402 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 AP5Z1O43299 807 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 CCP110O43303 1012 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 SPDYE6P0CI01 402 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 LRRC41Q15345 812 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 SLC16A10Q8TF71 515 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 SPZ1Q9BXG8 430 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 KIAA1024Q9UPX6 916 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 SRCAPQ6ZRS2 3230 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 IRF6O14896 467 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 ADAMTS3O15072 1205 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 RPN1P04843 607 aaKnown RBP10.18□□□□□ -0.78
CALD1-202ENST00000361901 UBXN1Q04323 297 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 PAK1Q13153 545 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 HERC4Q5GLZ8 1057 aaPredicted RBP10.18□□□□□ -0.78
CALD1-202ENST00000361901 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 MYOZ2Q9NPC6 264 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 NWD2Q9ULI1 1742 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 EZRP15311 586 aaKnown RBP10.18□□□□□ -0.78
CALD1-202ENST00000361901 GSDMDP57764 484 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 FBXO41Q8TF61 875 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 WRNIP1Q96S55 665 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 ZNF446Q9NWS9 450 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.18□□□□□ -0.781e-6■■■□□ 17.8
CALD1-202ENST00000361901 MYO3BQ8WXR4 1341 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 ATP2C1P98194 919 aaPredicted RBP10.18□□□□□ -0.78
CALD1-202ENST00000361901 PSMD2Q13200 908 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 CSGALNACT2Q8N6G5 542 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 CACTINQ8WUQ7 758 aaKnown RBP10.18□□□□□ -0.78
CALD1-202ENST00000361901 HPS3Q969F9 1004 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 CEP89Q96ST8 783 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 ANO3Q9BYT9 981 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 EHMT1Q9H9B1 1298 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 ODF2LQ9ULJ1 636 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 SH3BP1Q9Y3L3 701 aa10.18□□□□□ -0.78
CALD1-202ENST00000361901 C4BP0C0L5 1744 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 MYO5AQ9Y4I1 1855 aaKnown RBP10.17□□□□□ -0.78
CALD1-202ENST00000361901 TBCAO75347 108 aaKnown RBP10.17□□□□□ -0.78
CALD1-202ENST00000361901 SLC30A10Q6XR72 485 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 TSG101Q99816 390 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 MTFR1LQ9H019 292 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 SH3GLB2Q9NR46 395 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 MYO6Q9UM54 1294 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 MYH13Q9UKX3 1938 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 ASNSP08243 561 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 TRIM21P19474 475 aaKnown RBP10.17□□□□□ -0.78
CALD1-202ENST00000361901 STAT3P40763 770 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 PABPC4Q13310 644 aaKnown RBP eCLIP10.17□□□□□ -0.78
CALD1-202ENST00000361901 KIAA1328Q86T90 577 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 PAGR1Q9BTK6 254 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 SUDS3Q9H7L9 328 aaPredicted RBP10.17□□□□□ -0.78
CALD1-202ENST00000361901 ZNHIT6Q9NWK9 470 aaKnown RBP10.17□□□□□ -0.78
CALD1-202ENST00000361901 ZHX2Q9Y6X8 837 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 TESPA1A2RU30 521 aaPredicted RBP10.17□□□□□ -0.78
CALD1-202ENST00000361901 GCOM1H8Y6P7 765 aaPredicted RBP10.17□□□□□ -0.78
CALD1-202ENST00000361901 POLR2MP0CAP2 368 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 PLA2G4AP47712 749 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 FUT2Q10981 343 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 ANGEL2Q5VTE6 544 aaKnown RBP10.17□□□□□ -0.78
CALD1-202ENST00000361901 FUCA2Q9BTY2 467 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 DISC1Q9NRI5 854 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 RNF181Q9P0P0 153 aa10.17□□□□□ -0.78
CALD1-202ENST00000361901 TRAF5O00463 557 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 GTPBP6O43824 516 aaPredicted RBP10.16□□□□□ -0.78
CALD1-202ENST00000361901 DHX40Q8IX18 779 aaKnown RBP10.16□□□□□ -0.78
CALD1-202ENST00000361901 FAM151AQ8WW52 585 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 RAVER2Q9HCJ3 691 aaKnown RBP10.16□□□□□ -0.78
CALD1-202ENST00000361901 WNT10BO00744 389 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 MKRN3Q13064 507 aaKnown RBP10.16□□□□□ -0.78
CALD1-202ENST00000361901 IQCB1Q15051 598 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 KIF4BQ2VIQ3 1234 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 CCDC144BQ3MJ40 725 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 FKBP15Q5T1M5 1219 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 OTUD6BQ8N6M0 293 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 IGSF22Q8N9C0 903 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 HOOK2Q96ED9 719 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 TMOD4Q9NZQ9 345 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 CAPN7Q9Y6W3 813 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 TRIM49BA6NDI0 452 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 KIF3CO14782 793 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 CAND2O75155 1236 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 ENTPD3O75355 529 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 ARID5AQ03989 594 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 CACNA2D4Q7Z3S7 1137 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 PLA2G4DQ86XP0 818 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 SULF1Q8IWU6 871 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 RPUSD2Q8IZ73 545 aaKnown RBP10.16□□□□□ -0.78
CALD1-202ENST00000361901 SCLT1Q96NL6 688 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 DEFB129Q9H1M3 183 aa10.16□□□□□ -0.78
CALD1-202ENST00000361901 KLRG2A4D1S0 409 aaPredicted RBP10.15□□□□□ -0.78
CALD1-202ENST00000361901 GAS7O60861 476 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 TRAF1Q13077 416 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms