RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 SYNE4Q8N205 404 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 CCDC110Q8TBZ0 833 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 INO80BQ9C086 356 aaPredicted RBP14.74□□□□□ -0.05
LDB3-202ENST00000361373 PLCB1Q9NQ66 1216 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.74□□□□□ -0.05
LDB3-202ENST00000361373 NUB1Q9Y5A7 615 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 COPB2P35606 906 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 JAK3P52333 1124 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 TERF1P54274 439 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 SF3B3Q15393 1217 aaKnown RBP14.74□□□□□ -0.05
LDB3-202ENST00000361373 UAP1Q16222 522 aaPredicted RBP14.74□□□□□ -0.05
LDB3-202ENST00000361373 LONRF2Q1L5Z9 754 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 ABI1Q8IZP0 508 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 PROCA1Q8NCQ7 364 aaPredicted RBP14.74□□□□□ -0.05
LDB3-202ENST00000361373 P3H4Q92791 437 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 DCP1AQ9NPI6 582 aaPredicted RBP14.74□□□□□ -0.05
LDB3-202ENST00000361373 HERC5Q9UII4 1024 aaKnown RBP14.74□□□□□ -0.05
LDB3-202ENST00000361373 AKT3Q9Y243 479 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 GIPC1O14908 333 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 PIK3CAP42336 1068 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 RNASE9P60153 205 aaKnown RBP14.74□□□□□ -0.05
LDB3-202ENST00000361373 NR5A1Q13285 461 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 TRIM50Q86XT4 487 aa14.74□□□□□ -0.05
LDB3-202ENST00000361373 AFPP02771 609 aaKnown RBP14.73□□□□□ -0.05
LDB3-202ENST00000361373 ERCC6LQ2NKX8 1250 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 MAP7D3Q8IWC1 876 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 NBPF26B4DH59 902 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 NBPF10Q6P3W6 841 aaKnown RBP14.73□□□□□ -0.05
LDB3-202ENST00000361373 RNF207Q6ZRF8 634 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 NBPF15Q8N660 670 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 FAM167AQ96KS9 214 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 PNPLA7Q6ZV29 1317 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 E9PCH4 1651 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 CDC25BP30305 580 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 GBP1P32455 592 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 PKP1Q13835 747 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 KRT81Q14533 505 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 FYB2Q5VWT5 728 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 RCSD1Q6JBY9 416 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 KLHL7Q8IXQ5 586 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 OGFRQ9NZT2 677 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 EPN1Q9Y6I3 576 aaPredicted RBP14.73□□□□□ -0.05
LDB3-202ENST00000361373 CCNE1P24864 410 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 ENOX1Q8TC92 643 aaKnown RBP14.73□□□□□ -0.05
LDB3-202ENST00000361373 TMEM47Q9BQJ4 181 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 FRMPD1Q5SYB0 1578 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 SPATA31A1Q5TZJ5 1347 aa14.73□□□□□ -0.05
LDB3-202ENST00000361373 ABCB4P21439 1286 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 PTPREP23469 700 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 RESTQ13127 1097 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 RSAD2Q8WXG1 361 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 RUNDC3BQ96NL0 473 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 BBOF1Q8ND07 529 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 RSPH14Q9UHP6 348 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 RWDD2AQ9UIY3 292 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 CEP152O94986 1710 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 UBXN2AP68543 259 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 FOXO4P98177 505 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 PFKFB3Q16875 520 aaPredicted RBP14.72□□□□□ -0.05
LDB3-202ENST00000361373 KMT5BQ4FZB7 885 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 PDXDC2PQ6P474 469 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 CD163L1Q9NR16 1453 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 ABCB11O95342 1321 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 PLA2G4BP0C869 781 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 LRRC63Q05C16 580 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 SLFN12LQ6IEE8 588 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 NEK9Q8TD19 979 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 TDRD3Q9H7E2 651 aaKnown RBP14.72□□□□□ -0.05
LDB3-202ENST00000361373 ZHX1Q9UKY1 873 aaPredicted RBP14.72□□□□□ -0.05
LDB3-202ENST00000361373 LRRC7Q96NW7 1537 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 ORC4O43929 436 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 GPT2Q8TD30 523 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 FAM20AQ96MK3 541 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 TBC1D22BQ9NU19 505 aa14.72□□□□□ -0.05
LDB3-202ENST00000361373 KCNQ2O43526 872 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 ATP2C2O75185 946 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 ETF1P62495 437 aaKnown RBP14.71□□□□□ -0.05
LDB3-202ENST00000361373 PPFIA1Q13136 1202 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 METTL23Q86XA0 190 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 TCP11Q8WWU5 503 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 TRIM31Q9BZY9 425 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 NCOA3Q9Y6Q9 1424 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 ZNF579Q8NAF0 562 aaKnown RBP14.71□□□□□ -0.05
LDB3-202ENST00000361373 ATP2A3Q93084 1043 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 EMILIN3Q9NT22 766 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 ANAPC4Q9UJX5 808 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 PPP2R2CQ9Y2T4 447 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 USP17L10C9JJH3 530 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 THAP12O43422 761 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 ZSCAN20P17040 1043 aaPredicted RBP14.71□□□□□ -0.05
LDB3-202ENST00000361373 SMC1BQ8NDV3 1235 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 FAM84BQ96KN1 310 aaPredicted RBP14.71□□□□□ -0.05
LDB3-202ENST00000361373 THAP9Q9H5L6 903 aa14.71□□□□□ -0.05
LDB3-202ENST00000361373 CRCPO75575 148 aa14.71□□□□□ -0.06
LDB3-202ENST00000361373 GPR101Q96P66 508 aaPredicted RBP14.71□□□□□ -0.06
LDB3-202ENST00000361373 INO80Q9ULG1 1556 aaPredicted RBP14.7□□□□□ -0.06
LDB3-202ENST00000361373 SORBS3O60504 671 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 GMNNO75496 209 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 LONRF3Q496Y0 759 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 INTS8Q75QN2 995 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms