RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 KAT2BQ92831 832 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 CCDC114Q96M63 670 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 SELENOOQ9BVL4 669 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 GBP3Q9H0R5 595 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 SAR1BQ9Y6B6 198 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 RASSF10A6NK89 507 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 PPFIA4O75335 1185 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 PLCG2P16885 1265 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 TNNI2P48788 182 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 SP4Q02446 784 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 TTC38Q5R3I4 469 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 PIK3AP1Q6ZUJ8 805 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 ENAHQ8N8S7 591 aaPredicted RBP10.1□□□□□ -0.79
TOP1-201ENST00000361337 TNFRSF25Q93038 417 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 JAKMIP2Q96AA8 810 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 PSMB7Q99436 277 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 EHD2Q9NZN4 543 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 ATP6V0A2Q9Y487 856 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 SEMA3EO15041 775 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 PARP1P09874 1014 aaKnown RBP10.09□□□□□ -0.79
TOP1-201ENST00000361337 TUBB2AQ13885 445 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 KCTD1Q719H9 257 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 PNMA1Q8ND90 353 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 MICAL1Q8TDZ2 1067 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 N4BP2L2Q92802 583 aaPredicted RBP10.09□□□□□ -0.79
TOP1-201ENST00000361337 ZNF512BQ96KM6 892 aaPredicted RBP10.09□□□□□ -0.79
TOP1-201ENST00000361337 TACO1Q9BSH4 297 aaKnown RBP10.09□□□□□ -0.79
TOP1-201ENST00000361337 TUBB2BQ9BVA1 445 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 MKRN1Q9UHC7 482 aaKnown RBP10.09□□□□□ -0.79
TOP1-201ENST00000361337 RWDD2AQ9UIY3 292 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 FZD1Q9UP38 647 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 NID2Q14112 1375 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 PLEKP08567 350 aaPredicted RBP10.09□□□□□ -0.79
TOP1-201ENST00000361337 ACTN3Q08043 901 aaPredicted RBP10.09□□□□□ -0.79
TOP1-201ENST00000361337 NFIAQ12857 509 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 KRT26Q7Z3Y9 468 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 TAOK3Q9H2K8 898 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 PNPLA7Q6ZV29 1317 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 B4DLN1 442 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 KIF5BP33176 963 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 CRKP46108 304 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 ATP1A2P50993 1020 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 SLC7A5Q01650 507 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 KCTD19Q17RG1 926 aaPredicted RBP10.09□□□□□ -0.79
TOP1-201ENST00000361337 SAMD7Q7Z3H4 446 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 MB21D1Q8N884 522 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 LRRC15Q8TF66 581 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 MYO1AQ9UBC5 1043 aa10.09□□□□□ -0.79
TOP1-201ENST00000361337 SLIT2O94813 1529 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 DCAF8L1A6NGE4 600 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 PLSCR1O15162 318 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 FGFR2P21802 821 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 SLC1A4P43007 532 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 OR8K1Q8NGG5 319 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 BCAS4Q8TDM0 211 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 ZSCAN10Q96SZ4 725 aaPredicted RBP10.08□□□□□ -0.8
TOP1-201ENST00000361337 RNF26Q9BY78 433 aaPredicted RBP10.08□□□□□ -0.8
TOP1-201ENST00000361337 DMGDHQ9UI17 866 aaKnown RBP10.08□□□□□ -0.8
TOP1-201ENST00000361337 ZNF263O14978 683 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 RPN1P04843 607 aaKnown RBP10.08□□□□□ -0.8
TOP1-201ENST00000361337 ATP2C1P98194 919 aaPredicted RBP10.08□□□□□ -0.8
TOP1-201ENST00000361337 RASSF7Q02833 373 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 CCDC181Q5TID7 509 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 PAPD7Q5XG87 772 aaKnown RBP10.08□□□□□ -0.8
TOP1-201ENST00000361337 CCNI2Q6ZMN8 369 aaPredicted RBP10.08□□□□□ -0.8
TOP1-201ENST00000361337 FBXO33Q7Z6M2 555 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 SP8Q8IXZ3 490 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 TBC1D31Q96DN5 1066 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 COA1Q9GZY4 146 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 LUC7L2Q9Y383 392 aaKnown RBP10.08□□□□□ -0.8
TOP1-201ENST00000361337 SORBS3O60504 671 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 EZRP15311 586 aaKnown RBP10.08□□□□□ -0.8
TOP1-201ENST00000361337 CXCR5P32302 372 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 ZNF507Q8TCN5 953 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 FERMT2Q96AC1 680 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 DNAJC7Q99615 494 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 CCDC113Q9H0I3 377 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 VIPAS39Q9H9C1 493 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.08□□□□□ -0.8
TOP1-201ENST00000361337 JADE2Q9NQC1 790 aa10.08□□□□□ -0.8
TOP1-201ENST00000361337 IRAK1P51617 712 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 ENOX2Q16206 610 aaKnown RBP10.07□□□□□ -0.8
TOP1-201ENST00000361337 MCTP2Q6DN12 878 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 CCDC174Q6PII3 467 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 KIAA1328Q86T90 577 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 CALR3Q96L12 384 aaKnown RBP10.07□□□□□ -0.8
TOP1-201ENST00000361337 HAUS4Q9H6D7 363 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 MAST2Q6P0Q8 1798 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 LETM2Q2VYF4 491 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 CERKLQ49MI3 558 aaPredicted RBP10.07□□□□□ -0.8
TOP1-201ENST00000361337 SLC10A5Q5PT55 438 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 ZNF658Q5TYW1 1059 aaPredicted RBP10.07□□□□□ -0.8
TOP1-201ENST00000361337 TMTC2Q8N394 836 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 SRBD1Q8N5C6 995 aaKnown RBP10.07□□□□□ -0.8
TOP1-201ENST00000361337 LRRC1Q9BTT6 524 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 H7C1D1 291 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 IDEP14735 1019 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 ERCC3P19447 782 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 HPDP32754 393 aaPredicted RBP10.07□□□□□ -0.8
TOP1-201ENST00000361337 NAALADL2Q58DX5 795 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms