RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 Q9Y3F1 56 aa8.7□□□□□ -1.02
CCL28-201ENST00000361115 CCDC151A5D8V7 595 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 BEND6Q5SZJ8 279 aaPredicted RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 ZSCAN29Q8IWY8 852 aaPredicted RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 SMARCC2Q8TAQ2 1214 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 NUP133Q8WUM0 1156 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 MRPS27Q92552 414 aaKnown RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 GOLGA1Q92805 767 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 NSUN4Q96CB9 384 aaKnown RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 ZBTB21Q9ULJ3 1066 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 FZD1Q9UP38 647 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 CTDNEP1O95476 244 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 CLTBP09497 229 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 FPGSQ05932 587 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 PKN1Q16512 942 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 CT47A1Q5JQC4 288 aaPredicted RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 PCSK9Q8NBP7 692 aaKnown RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 SGSM3Q96HU1 749 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 CCDC17Q96LX7 622 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 PNKPQ96T60 521 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 PUS3Q9BZE2 481 aaKnown RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 ANKZF1Q9H8Y5 726 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 CABP5Q9NP86 173 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 UTRNP46939 3433 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 LRRC37A2A6NM11 1700 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 GREB1LQ9C091 1923 aaPredicted RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 NLRP12P59046 1061 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 NFIAQ12857 509 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 BRD3Q15059 726 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 LRRC24Q50LG9 513 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 TOGARAM2Q6ZUX3 1019 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 MIGA2Q7L4E1 593 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 AACSQ86V21 672 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 CDAN1Q8IWY9 1227 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 KRI1Q8N9T8 703 aaKnown RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 NSUN7Q8NE18 718 aaKnown RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 PRRX2Q99811 253 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 PDLIM7Q9NR12 457 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 SNRKQ9NRH2 765 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 SCAF8Q9UPN6 1271 aaKnown RBP8.69□□□□□ -1.02
CCL28-201ENST00000361115 HCN4Q9Y3Q4 1203 aa8.69□□□□□ -1.02
CCL28-201ENST00000361115 ZSCAN12O43309 604 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 NUBP1P53384 320 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 UBASH3AP57075 661 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 PTPN11Q06124 597 aaPredicted RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 PDE4DQ08499 809 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 HSP90AB4PQ58FF6 505 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 TREML2Q5T2D2 321 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 NAA16Q6N069 864 aaPredicted RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 ERC1Q8IUD2 1116 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 TEX11Q8IYF3 940 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 DIS3LQ8TF46 1054 aaKnown RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 PPM1EQ8WY54 764 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 HERVK_113Q902F9 699 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 IRX2Q9BZI1 471 aaPredicted RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 RBPJLQ9UBG7 517 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 DCDC2CA8MYV0 355 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 PHACTR2O75167 634 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 OAZ1P54368 228 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 SPP2Q13103 211 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 KARSQ15046 597 aaKnown RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 TTF1Q15361 905 aaPredicted RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 ZRSR1Q15695 479 aaKnown RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 TKFCQ3LXA3 575 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 ZNF396Q96N95 335 aaPredicted RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 CCDC8Q9H0W5 538 aaPredicted RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 DEF6Q9H4E7 631 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 ABCB6Q9NP58 842 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 TLR7Q9NYK1 1049 aaKnown RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 ZMYND8Q9ULU4 1186 aaPredicted RBP8.68□□□□□ -1.02
CCL28-201ENST00000361115 PLXNA1Q9UIW2 1896 aa8.68□□□□□ -1.02
CCL28-201ENST00000361115 DDTLA6NHG4 134 aaPredicted RBP8.67□□□□□ -1.02
CCL28-201ENST00000361115 ATP2A1O14983 1001 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 DHX8Q14562 1220 aaKnown RBP8.67□□□□□ -1.02
CCL28-201ENST00000361115 HDXQ7Z353 690 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 FCHSD1Q86WN1 690 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 VSTM4Q8IW00 320 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 TMEM199Q8N511 208 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 SPATA5Q8NB90 893 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 PHOSPHO2Q8TCD6 241 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 NEK1Q96PY6 1258 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 FSD1Q9BTV5 496 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 BOLA2Q9H3K6 86 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 FBXO40Q9UH90 709 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 PUF60Q9UHX1 559 aaKnown RBP8.67□□□□□ -1.02
CCL28-201ENST00000361115 MSRAQ9UJ68 235 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 MYH8P13535 1937 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 PTPDC1A2A3K4 754 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 TRIM75PA6NK02 468 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 WDR46O15213 610 aaKnown RBP8.67□□□□□ -1.02
CCL28-201ENST00000361115 CNMDO75829 334 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 CHGBP05060 677 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 SLC3A2P08195 630 aaKnown RBP8.67□□□□□ -1.02
CCL28-201ENST00000361115 PRDX5P30044 214 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 MECOMQ03112 1051 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 GRIK5Q16478 980 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 JAKMIP3Q5VZ66 844 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 ADALQ6DHV7 355 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 CNNM3Q8NE01 707 aa8.67□□□□□ -1.02
CCL28-201ENST00000361115 GPATCH3Q96I76 525 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms